RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 HOXA13P31271 388 aaPredicted RBP10.35□□□□□ -0.75
MSH3-203ENST00000512531 HNRNPH3P31942 346 aaKnown RBP10.35□□□□□ -0.75
MSH3-203ENST00000512531 SFNP31947 248 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 MCCD1P59942 119 aaPredicted RBP10.35□□□□□ -0.75
MSH3-203ENST00000512531 BMS1Q14692 1282 aaKnown RBP10.35□□□□□ -0.75
MSH3-203ENST00000512531 ECM1Q16610 540 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 NFIL3Q16649 462 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 BMT2Q1RMZ1 405 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 TKFCQ3LXA3 575 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 SFMBT2Q5VUG0 894 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 RAD9BQ6WBX8 426 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 C16orf59Q7L2K0 433 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 TAS1R3Q7RTX0 852 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 CTAGE6Q86UF2 777 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 NLRX1Q86UT6 975 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 TPH2Q8IWU9 490 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 CTAGE4Q8IX94 777 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 FAM126BQ8IXS8 530 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 CCDC155Q8N6L0 562 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 SLC43A3Q8NBI5 491 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 TRIM58Q8NG06 486 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 RDM1Q8NG50 284 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 C1orf216Q8TAB5 229 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 HERVK_113Q902F9 699 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 JAKMIP2Q96AA8 810 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 CDHR1Q96JP9 859 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 GAS2L1Q99501 681 aaPredicted RBP10.35□□□□□ -0.75
MSH3-203ENST00000512531 MXRA8Q9BRK3 442 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 KATNBL1Q9H079 304 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 ACBD3Q9H3P7 528 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 TMEM206Q9H813 350 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 NHEJ1Q9H9Q4 299 aaPredicted RBP10.35□□□□□ -0.75
MSH3-203ENST00000512531 OGFRQ9NZT2 677 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 ZHX1Q9UKY1 873 aaPredicted RBP10.35□□□□□ -0.75
MSH3-203ENST00000512531 PLAGL2Q9UPG8 496 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 TRAF3IP3Q9Y228 551 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 FRMD4BQ9Y2L6 1034 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 Q9Y3F1 56 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 RIPK3Q9Y572 518 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 PCDHGA11Q9Y5H2 935 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 ASB14A6NK59 587 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 SFI1A8K8P3 1242 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 FAM86B1E9PN63 330 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 IPO5O00410 1097 aaKnown RBP10.34□□□□□ -0.75
MSH3-203ENST00000512531 STAM2O75886 525 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 AFPP02771 609 aaKnown RBP10.34□□□□□ -0.75
MSH3-203ENST00000512531 P4HBP07237 508 aaKnown RBP10.34□□□□□ -0.75
MSH3-203ENST00000512531 FAM86B2P0C5J1 330 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 C6orf222P0C671 652 aaPredicted RBP10.34□□□□□ -0.75
MSH3-203ENST00000512531 MAPTP10636 758 aaKnown RBP10.34□□□□□ -0.75
MSH3-203ENST00000512531 NR2F2P24468 414 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 HSD17B4P51659 736 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 JAK3P52333 1124 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 VAV2P52735 878 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 CHMP4BP1P59074 171 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 GIT2Q14161 759 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 MYBPC2Q14324 1141 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 GNASQ5JWF2 1037 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 POTEGQ6S5H5 508 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 ARMCX2Q7L311 632 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 MIER3Q7Z3K6 550 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 SRGAP1Q7Z6B7 1085 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 USP37Q86T82 979 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 ANKRD35Q8N283 1001 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 MYCT1Q8N699 235 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 FOXJ1Q92949 421 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 SECISBP2LQ93073 1101 aaKnown RBP10.34□□□□□ -0.75
MSH3-203ENST00000512531 LENG1Q96BZ8 264 aaPredicted RBP10.34□□□□□ -0.75
MSH3-203ENST00000512531 FGD4Q96M96 766 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 MPHOSPH6Q99547 160 aaKnown RBP10.34□□□□□ -0.75
MSH3-203ENST00000512531 MKNK1Q9BUB5 465 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 CARD6Q9BX69 1037 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 PBX4Q9BYU1 374 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 BHMT2Q9H2M3 363 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 ZSWIM4Q9H7M6 989 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 IL23AQ9NPF7 189 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 LARSQ9P2J5 1176 aaKnown RBP10.34□□□□□ -0.75
MSH3-203ENST00000512531 VAV3Q9UKW4 847 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 EXOC7Q9UPT5 735 aa10.34□□□□□ -0.75
MSH3-203ENST00000512531 IGLV3-22A0A075B6J6 115 aa10.33□□□□□ -0.76
MSH3-203ENST00000512531 LOC102724159A0A0B4J2E5 919 aa10.33□□□□□ -0.76
MSH3-203ENST00000512531 GTPBP10A4D1E9 387 aaKnown RBP10.33□□□□□ -0.76
MSH3-203ENST00000512531 MYADML2A6NDP7 307 aa10.33□□□□□ -0.76
MSH3-203ENST00000512531 MEIS1O00470 390 aa10.33□□□□□ -0.76
MSH3-203ENST00000512531 EDIL3O43854 480 aa10.33□□□□□ -0.76
MSH3-203ENST00000512531 ZEB2O60315 1214 aa10.33□□□□□ -0.76
MSH3-203ENST00000512531 N4BP1O75113 896 aaKnown RBP10.33□□□□□ -0.76
MSH3-203ENST00000512531 PSMD10O75832 226 aa10.33□□□□□ -0.76
MSH3-203ENST00000512531 SERPING1P05155 500 aa10.33□□□□□ -0.76
MSH3-203ENST00000512531 SCP2P22307 547 aa10.33□□□□□ -0.76
MSH3-203ENST00000512531 GUCY2CP25092 1073 aa10.33□□□□□ -0.76
MSH3-203ENST00000512531 PSMC2P35998 433 aaKnown RBP10.33□□□□□ -0.76
MSH3-203ENST00000512531 SNAP25P60880 206 aa10.33□□□□□ -0.76
MSH3-203ENST00000512531 KRT76Q01546 638 aa10.33□□□□□ -0.76
MSH3-203ENST00000512531 GHRHRQ02643 423 aa10.33□□□□□ -0.76
MSH3-203ENST00000512531 SPIRE1Q08AE8 756 aa10.33□□□□□ -0.76
MSH3-203ENST00000512531 BRD3Q15059 726 aa10.33□□□□□ -0.76
MSH3-203ENST00000512531 PWP2Q15269 919 aaKnown RBP10.33□□□□□ -0.76
MSH3-203ENST00000512531 ELF2Q15723 593 aa10.33□□□□□ -0.76
MSH3-203ENST00000512531 PTPN21Q16825 1174 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms