RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.79□□□□□ -0.36
PRDM16-207ENST00000512462 NGRNQ9NPE2 291 aaKnown RBP12.79□□□□□ -0.36
PRDM16-207ENST00000512462 PITPNM2Q9BZ72 1349 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 GRID2IPA4D2P6 1211 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 TBX3O15119 743 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 WDR46O15213 610 aaKnown RBP12.79□□□□□ -0.36
PRDM16-207ENST00000512462 ITGB5P18084 799 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 STX2P32856 288 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 ZNF568Q3ZCX4 644 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 FAM182AQ5T1J6 154 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 HSPH1Q92598 858 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 GMCL1Q96IK5 515 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 ZBTB45Q96K62 511 aaPredicted RBP12.79□□□□□ -0.36
PRDM16-207ENST00000512462 TACO1Q9BSH4 297 aaKnown RBP12.79□□□□□ -0.36
PRDM16-207ENST00000512462 TMEM117Q9H0C3 514 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 PASKQ96RG2 1323 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 MYO1CO00159 1063 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 STAM2O75886 525 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 CSPG5O95196 566 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 BASP1P80723 227 aaKnown RBP12.78□□□□□ -0.36
PRDM16-207ENST00000512462 B4GALNT4Q76KP1 1039 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 RSAD2Q8WXG1 361 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 LBHD1Q9BQE6 289 aaPredicted RBP12.78□□□□□ -0.36
PRDM16-207ENST00000512462 IDI2Q9BXS1 227 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 TEX13BQ9BXU2 312 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 STK33Q9BYT3 514 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 INTS9Q9NV88 658 aaKnown RBP12.78□□□□□ -0.36
PRDM16-207ENST00000512462 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.78□□□□□ -0.36
PRDM16-207ENST00000512462 BAIAP2L1Q9UHR4 511 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.78□□□□□ -0.36
PRDM16-207ENST00000512462 PLS3P13797 630 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 SCP2P22307 547 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 JAK3P52333 1124 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 RWDD2BP57060 319 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 TMED2Q15363 201 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 PPP6R3Q5H9R7 873 aaPredicted RBP12.78□□□□□ -0.36
PRDM16-207ENST00000512462 DPY19L2Q6NUT2 758 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 LLGL2Q6P1M3 1020 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 MOB2Q70IA6 237 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 CCDC13Q8IYE1 715 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 CCDC33Q8N5R6 958 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 FBXO41Q8TF61 875 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 TRAPPC12Q8WVT3 735 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 TATDN2Q93075 761 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 ICAM1P05362 532 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 GNA15P30679 374 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 NPTX2P47972 431 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 NUMBP49757 651 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 SATB1Q01826 763 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 MTMR3Q13615 1198 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 SMTNL2Q2TAL5 461 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 KIAA1755Q5JYT7 1200 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 FAM47EQ6ZV65 393 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 ZSWIM2Q8NEG5 633 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 CASKIN2Q8WXE0 1202 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 C9orf72Q96LT7 481 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 TAF1DQ9H5J8 278 aaPredicted RBP12.78□□□□□ -0.36
PRDM16-207ENST00000512462 SEPT10Q9P0V9 454 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 BCL9LQ86UU0 1499 aa12.78□□□□□ -0.36
PRDM16-207ENST00000512462 H7C0C1 242 aa12.77□□□□□ -0.36
PRDM16-207ENST00000512462 DDNO94850 711 aaPredicted RBP12.77□□□□□ -0.36
PRDM16-207ENST00000512462 ATP5OP48047 213 aa12.77□□□□□ -0.36
PRDM16-207ENST00000512462 RARRES1P49788 294 aa12.77□□□□□ -0.36
PRDM16-207ENST00000512462 NFX1Q12986 1120 aaKnown RBP12.77□□□□□ -0.36
PRDM16-207ENST00000512462 MMS22LQ6ZRQ5 1243 aa12.77□□□□□ -0.36
PRDM16-207ENST00000512462 ARHGEF19Q8IW93 802 aa12.77□□□□□ -0.36
PRDM16-207ENST00000512462 MDM1Q8TC05 714 aa12.77□□□□□ -0.36
PRDM16-207ENST00000512462 PDCD2LQ9BRP1 358 aa12.77□□□□□ -0.36
PRDM16-207ENST00000512462 KCNMB3Q9NPA1 279 aa12.77□□□□□ -0.36
PRDM16-207ENST00000512462 SEL1LQ9UBV2 794 aa12.77□□□□□ -0.36
PRDM16-207ENST00000512462 TLR3O15455 904 aaKnown RBP12.77□□□□□ -0.37
PRDM16-207ENST00000512462 CYP2C19P33261 490 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 IRX4P78413 519 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 WDR72Q3MJ13 1102 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 FAM133BQ5BKY9 247 aaKnown RBP12.77□□□□□ -0.37
PRDM16-207ENST00000512462 FAM160B1Q5W0V3 765 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 OR6B2Q6IFH4 312 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 MCPH1Q8NEM0 835 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 TPCN2Q8NHX9 752 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 NEK9Q8TD19 979 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 ARHGEF26Q96DR7 871 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 HEXIM2Q96MH2 286 aaKnown RBP12.77□□□□□ -0.37
PRDM16-207ENST00000512462 ANAPC5Q9UJX4 755 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 A0A1W2PQJ5 194 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 CA8P35219 290 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 STAT5BP51692 787 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 BBS9Q3SYG4 887 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 RNF34Q969K3 372 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 POLR3CQ9BUI4 534 aaPredicted RBP12.77□□□□□ -0.37
PRDM16-207ENST00000512462 HOXC10Q9NYD6 342 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 PARP2Q9UGN5 583 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 PPP1R9AQ9ULJ8 1098 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 MAD1L1Q9Y6D9 718 aa12.77□□□□□ -0.37
PRDM16-207ENST00000512462 DDX3XO00571 662 aaKnown RBP eCLIP12.76□□□□□ -0.373e-7■■■■□ 19.6
PRDM16-207ENST00000512462 TLR2O60603 784 aa12.76□□□□□ -0.37
PRDM16-207ENST00000512462 ACTR2P61160 394 aa12.76□□□□□ -0.37
PRDM16-207ENST00000512462 ATP11AP98196 1134 aa12.76□□□□□ -0.37
PRDM16-207ENST00000512462 MAPK6Q16659 721 aa12.76□□□□□ -0.37
PRDM16-207ENST00000512462 RFX6Q8HWS3 928 aa12.76□□□□□ -0.37
PRDM16-207ENST00000512462 CREG2Q8IUH2 290 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms