RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 GPR62Q9BZJ7 368 aa10.3□□□□□ -0.76
NUP54-211ENST00000512151 FNIP2Q9P278 1114 aa10.3□□□□□ -0.76
NUP54-211ENST00000512151 GABBR1Q9UBS5 961 aa10.3□□□□□ -0.76
NUP54-211ENST00000512151 FBXW11Q9UKB1 542 aa10.3□□□□□ -0.76
NUP54-211ENST00000512151 PCDHB2Q9Y5E7 798 aa10.3□□□□□ -0.76
NUP54-211ENST00000512151 TAF6LQ9Y6J9 622 aa10.3□□□□□ -0.76
NUP54-211ENST00000512151 A0A087WZ62 844 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 FAM86B1E9PN63 330 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 ECI2O75521 394 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 EPN2O95208 641 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 C1RP00736 705 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 FAM86B2P0C5J1 330 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 CHRNB1P11230 501 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 SKIP12755 728 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 TMOD1P28289 359 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 MFAP1P55081 439 aaKnown RBP10.29□□□□□ -0.76
NUP54-211ENST00000512151 DSC1Q08554 894 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 GRM2Q14416 872 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 PPP2R5DQ14738 602 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 PLA2G2CQ5R387 149 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 UBXN11Q5T124 520 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 C19orf48Q6RUI8 117 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 PRSS55Q6UWB4 352 aaPredicted RBP10.29□□□□□ -0.76
NUP54-211ENST00000512151 CWC27Q6UX04 472 aaKnown RBP10.29□□□□□ -0.76
NUP54-211ENST00000512151 TICAM2Q86XR7 235 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 BBC3Q96PG8 261 aaPredicted RBP10.29□□□□□ -0.76
NUP54-211ENST00000512151 FDXACB1Q9BRP7 624 aaPredicted RBP10.29□□□□□ -0.76
NUP54-211ENST00000512151 IER2Q9BTL4 223 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 DSCC1Q9BVC3 393 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 GCOM2Q9BZD3 368 aaPredicted RBP10.29□□□□□ -0.76
NUP54-211ENST00000512151 IL25Q9H293 177 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 RSAD1Q9HA92 442 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 RBM12Q9NTZ6 932 aaKnown RBP10.29□□□□□ -0.76
NUP54-211ENST00000512151 MIOSQ9NXC5 875 aa10.29□□□□□ -0.76
NUP54-211ENST00000512151 SEC63Q9UGP8 760 aaKnown RBP10.29□□□□□ -0.76
NUP54-211ENST00000512151 ADAM12O43184 909 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 FCARP24071 287 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 CNR2P34972 360 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 RAP1GAPP47736 663 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 RAB27AP51159 221 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 ANTXR2P58335 489 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 NUCB1Q02818 461 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 SLC5A9Q2M3M2 681 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 TYW1BQ6NUM6 668 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 Q6ZS52 159 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 CENPQQ7L2Z9 268 aaPredicted RBP10.28□□□□□ -0.76
NUP54-211ENST00000512151 CATIPQ7Z7H3 387 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 KBTBD6Q86V97 674 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 ZNF710Q8N1W2 664 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 FAM3CQ92520 227 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 RABGGTAQ92696 567 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 DNASE1L2Q92874 299 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 RILPL2Q969X0 211 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 PGBD4Q96DM1 585 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 MCRS1Q96EZ8 462 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 ANO3Q9BYT9 981 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 LNPKQ9C0E8 428 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 DNMT3BQ9UBC3 853 aaKnown RBP10.28□□□□□ -0.76
NUP54-211ENST00000512151 POLIQ9UNA4 740 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 CEP131Q9UPN4 1083 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 TICRRQ7Z2Z1 1910 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 WDFY3Q8IZQ1 3526 aa10.28□□□□□ -0.76
NUP54-211ENST00000512151 MAN2B1O00754 1011 aa10.27□□□□□ -0.76
NUP54-211ENST00000512151 PAPSS2O95340 614 aaPredicted RBP10.27□□□□□ -0.76
NUP54-211ENST00000512151 C8AP07357 584 aa10.27□□□□□ -0.76
NUP54-211ENST00000512151 HNRNPA1P09651 372 aaKnown RBP eCLIP10.27□□□□□ -0.76
NUP54-211ENST00000512151 SFPQP23246 707 aaKnown RBP eCLIP10.27□□□□□ -0.76
NUP54-211ENST00000512151 UGCGQ16739 394 aa10.27□□□□□ -0.76
NUP54-211ENST00000512151 PPM1LQ5SGD2 360 aa10.27□□□□□ -0.76
NUP54-211ENST00000512151 SH3PXD2AQ5TCZ1 1133 aa10.27□□□□□ -0.76
NUP54-211ENST00000512151 RNF43Q68DV7 783 aa10.27□□□□□ -0.76
NUP54-211ENST00000512151 KIAA1211LQ6NV74 962 aa10.27□□□□□ -0.76
NUP54-211ENST00000512151 PDZD3Q86UT5 571 aa10.27□□□□□ -0.76
NUP54-211ENST00000512151 WDR5BQ86VZ2 330 aa10.27□□□□□ -0.76
NUP54-211ENST00000512151 CHD1LQ86WJ1 897 aa10.27□□□□□ -0.76
NUP54-211ENST00000512151 PLA2G4DQ86XP0 818 aa10.27□□□□□ -0.76
NUP54-211ENST00000512151 KSR1Q8IVT5 923 aa10.27□□□□□ -0.76
NUP54-211ENST00000512151 SPEM1Q8N4L4 309 aa10.27□□□□□ -0.76
NUP54-211ENST00000512151 IGDCC4Q8TDY8 1250 aa10.27□□□□□ -0.76
NUP54-211ENST00000512151 CEP89Q96ST8 783 aa10.27□□□□□ -0.76
NUP54-211ENST00000512151 CLSTN3Q9BQT9 956 aa10.27□□□□□ -0.76
NUP54-211ENST00000512151 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.27□□□□□ -0.76
NUP54-211ENST00000512151 KANSL3Q9P2N6 904 aa10.27□□□□□ -0.76
NUP54-211ENST00000512151 IGLV3-22A0A075B6J6 115 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 TMEM150BA6NC51 233 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 C4orf47A7E2U8 309 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 IPO5O00410 1097 aaKnown RBP10.26□□□□□ -0.77
NUP54-211ENST00000512151 OATP04181 439 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 CAPNS1P04632 268 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 PSAPP07602 524 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 CEBPBP17676 345 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 SMARCA1P28370 1054 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 PRKCEQ02156 737 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 PTGDRQ13258 359 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 TARBP2Q15633 366 aaKnown RBP10.26□□□□□ -0.77
NUP54-211ENST00000512151 PABPC1LQ4VXU2 614 aaKnown RBP10.26□□□□□ -0.77
NUP54-211ENST00000512151 RTP2Q5QGT7 225 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 ZNF746Q6NUN9 644 aaPredicted RBP10.26□□□□□ -0.77
NUP54-211ENST00000512151 FUT10Q6P4F1 479 aa10.26□□□□□ -0.77
NUP54-211ENST00000512151 NIPA1Q7RTP0 329 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms