RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 KANSL3Q9P2N6 904 aa14.65□□□□□ -0.06
RNF4-215ENST00000511843 CD207Q9UJ71 328 aa14.65□□□□□ -0.06
RNF4-215ENST00000511843 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.64□□□□□ -0.07
RNF4-215ENST00000511843 C2orf71A6NGG8 1288 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 K7ERI5 159 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 SLC16A4O15374 487 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 MBTPS2O43462 519 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 STX6O43752 255 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 UBA7P41226 1012 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 DMP1Q13316 513 aaPredicted RBP14.64□□□□□ -0.07
RNF4-215ENST00000511843 MCM6Q14566 821 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 SMC1AQ14683 1233 aaKnown RBP14.64□□□□□ -0.07
RNF4-215ENST00000511843 ARSHQ5FYA8 562 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 PDE12Q6L8Q7 609 aaKnown RBP14.64□□□□□ -0.07
RNF4-215ENST00000511843 FAM178BQ8IXR5 827 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 COLGALT2Q8IYK4 626 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 SYT2Q8N9I0 419 aaPredicted RBP14.64□□□□□ -0.07
RNF4-215ENST00000511843 EPSTI1Q96J88 318 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 MSLNLQ96KJ4 702 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 AK8Q96MA6 479 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 DRC1Q96MC2 740 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 CLIC6Q96NY7 704 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 USP28Q96RU2 1077 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 APOL5Q9BWW9 433 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 ZBP1Q9H171 429 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 UBN1Q9NPG3 1134 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 KMT5AQ9NQR1 393 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 MARCH5Q9NX47 278 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 SNTG2Q9NY99 539 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 FAN1Q9Y2M0 1017 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 GDAQ9Y2T3 454 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 GIT1Q9Y2X7 761 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 PHLPP2Q6ZVD8 1323 aa14.64□□□□□ -0.07
RNF4-215ENST00000511843 BDP1A6H8Y1 2624 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 VWA8A3KMH1 1905 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 INPPL1O15357 1258 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 RECQL4O94761 1208 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 CXCL14O95715 111 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 BMP15O95972 392 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 GUCY2CP25092 1073 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 LONP1P36776 959 aaKnown RBP14.63□□□□□ -0.07
RNF4-215ENST00000511843 EFNA5P52803 228 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 DSC1Q08554 894 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 ATF7IP2Q5U623 682 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 TAS1R1Q7RTX1 841 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 DDX53Q86TM3 631 aaKnown RBP14.63□□□□□ -0.07
RNF4-215ENST00000511843 GPBP1Q86WP2 473 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 HSCBQ8IWL3 235 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 HACE1Q8IYU2 909 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 MRPL43Q8N983 215 aaKnown RBP14.63□□□□□ -0.07
RNF4-215ENST00000511843 RASSF8Q8NHQ8 419 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 RSPH1Q8WYR4 309 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 CALML4Q96GE6 196 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 TMEM175Q9BSA9 504 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 NGRNQ9NPE2 291 aaKnown RBP14.63□□□□□ -0.07
RNF4-215ENST00000511843 BLOC1S4Q9NUP1 217 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 ARHGAP28Q9P2N2 729 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 FBXO2Q9UK22 296 aaPredicted RBP14.63□□□□□ -0.07
RNF4-215ENST00000511843 C2orf16Q68DN1 1984 aa14.63□□□□□ -0.07
RNF4-215ENST00000511843 C2CD2LO14523 706 aa14.62□□□□□ -0.07
RNF4-215ENST00000511843 CLASP2O75122 1294 aaKnown RBP14.62□□□□□ -0.07
RNF4-215ENST00000511843 ALDH2P05091 517 aa14.62□□□□□ -0.07
RNF4-215ENST00000511843 SSTR3P32745 418 aaPredicted RBP14.62□□□□□ -0.07
RNF4-215ENST00000511843 SMAD4Q13485 552 aaKnown RBP14.62□□□□□ -0.07
RNF4-215ENST00000511843 KCNC3Q14003 757 aa14.62□□□□□ -0.07
RNF4-215ENST00000511843 ZBTB33Q86T24 672 aa14.62□□□□□ -0.07
RNF4-215ENST00000511843 CEP120Q8N960 986 aa14.62□□□□□ -0.07
RNF4-215ENST00000511843 RPS6KC1Q96S38 1066 aa14.62□□□□□ -0.07
RNF4-215ENST00000511843 REEP2Q9BRK0 252 aa14.62□□□□□ -0.07
RNF4-215ENST00000511843 PAAF1Q9BRP4 392 aa14.62□□□□□ -0.07
RNF4-215ENST00000511843 ADPGKQ9BRR6 497 aa14.62□□□□□ -0.07
RNF4-215ENST00000511843 TARS2Q9BW92 718 aaKnown RBP14.62□□□□□ -0.07
RNF4-215ENST00000511843 CDH22Q9UJ99 828 aa14.62□□□□□ -0.07
RNF4-215ENST00000511843 PTGESO14684 152 aa14.61□□□□□ -0.07
RNF4-215ENST00000511843 CTSAP10619 480 aa14.61□□□□□ -0.07
RNF4-215ENST00000511843 HARSP12081 509 aaKnown RBP14.61□□□□□ -0.07
RNF4-215ENST00000511843 PLS3P13797 630 aa14.61□□□□□ -0.07
RNF4-215ENST00000511843 OSTNP61366 133 aa14.61□□□□□ -0.07
RNF4-215ENST00000511843 ZP2Q05996 745 aa14.61□□□□□ -0.07
RNF4-215ENST00000511843 GRIK3Q13003 919 aa14.61□□□□□ -0.07
RNF4-215ENST00000511843 PTPN14Q15678 1187 aa14.61□□□□□ -0.07
RNF4-215ENST00000511843 PUS10Q3MIT2 529 aaKnown RBP14.61□□□□□ -0.07
RNF4-215ENST00000511843 FOXD4L6Q3SYB3 417 aaPredicted RBP14.61□□□□□ -0.07
RNF4-215ENST00000511843 ZNF568Q3ZCX4 644 aa14.61□□□□□ -0.07
RNF4-215ENST00000511843 KANK3Q6NY19 840 aa14.61□□□□□ -0.07
RNF4-215ENST00000511843 FOXD4L3Q6VB84 417 aaPredicted RBP14.61□□□□□ -0.07
RNF4-215ENST00000511843 SMRP1Q8NCR6 262 aa14.61□□□□□ -0.07
RNF4-215ENST00000511843 FEZF2Q8TBJ5 459 aa14.61□□□□□ -0.07
RNF4-215ENST00000511843 HASPINQ8TF76 798 aa14.61□□□□□ -0.07
RNF4-215ENST00000511843 RAD54LQ92698 747 aa14.61□□□□□ -0.07
RNF4-215ENST00000511843 B3GALT6Q96L58 329 aa14.61□□□□□ -0.07
RNF4-215ENST00000511843 CDCA3Q99618 268 aaPredicted RBP14.61□□□□□ -0.07
RNF4-215ENST00000511843 ACO2Q99798 780 aaKnown RBP14.61□□□□□ -0.07
RNF4-215ENST00000511843 CDT1Q9H211 546 aa14.61□□□□□ -0.07
RNF4-215ENST00000511843 TNFSF13BQ9Y275 285 aa14.61□□□□□ -0.07
RNF4-215ENST00000511843 USP15Q9Y4E8 981 aaPredicted RBP14.61□□□□□ -0.07
RNF4-215ENST00000511843 HCFC2Q9Y5Z7 792 aa14.61□□□□□ -0.07
RNF4-215ENST00000511843 MTCL1Q9Y4B5 1905 aaKnown RBP14.6□□□□□ -0.07
RNF4-215ENST00000511843 CASTOR2A6NHX0 329 aa14.6□□□□□ -0.07
RNF4-215ENST00000511843 HSP90AA1P07900 732 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms