RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 SPTLC1O15269 473 aa21.27■■□□□ 1
HMGCS1-206ENST00000511774 LAMTOR5O43504 91 aa21.27■■□□□ 1
HMGCS1-206ENST00000511774 UBXN2BQ14CS0 331 aa21.27■■□□□ 1
HMGCS1-206ENST00000511774 SLC44A4Q53GD3 710 aa21.27■■□□□ 1
HMGCS1-206ENST00000511774 FUT10Q6P4F1 479 aa21.27■■□□□ 1
HMGCS1-206ENST00000511774 ELMSAN1Q6PJG2 1045 aa21.27■■□□□ 1
HMGCS1-206ENST00000511774 TSSK4Q6SA08 328 aa21.27■■□□□ 1
HMGCS1-206ENST00000511774 PRSS55Q6UWB4 352 aaPredicted RBP21.27■■□□□ 1
HMGCS1-206ENST00000511774 ITFG1Q8TB96 612 aa21.27■■□□□ 1
HMGCS1-206ENST00000511774 NELL1Q92832 810 aa21.27■■□□□ 1
HMGCS1-206ENST00000511774 CPB2Q96IY4 423 aa21.27■■□□□ 1
HMGCS1-206ENST00000511774 DHX33Q9H6R0 707 aaKnown RBP21.27■■□□□ 1
HMGCS1-206ENST00000511774 FNIP2Q9P278 1114 aa21.27■■□□□ 1
HMGCS1-206ENST00000511774 SMG5Q9UPR3 1016 aaKnown RBP21.27■■□□□ 1
HMGCS1-206ENST00000511774 VWA8A3KMH1 1905 aa21.27■■□□□ 1
HMGCS1-206ENST00000511774 SHISA7A6NL88 538 aa21.26■□□□□ 0.99
HMGCS1-206ENST00000511774 FAM170BA6NMN3 283 aa21.26■□□□□ 0.99
HMGCS1-206ENST00000511774 LILRB5O75023 590 aa21.26■□□□□ 0.99
HMGCS1-206ENST00000511774 TSGA10IPQ3SY00 556 aa21.26■□□□□ 0.99
HMGCS1-206ENST00000511774 SHDQ96IW2 340 aa21.26■□□□□ 0.99
HMGCS1-206ENST00000511774 EPC1Q9H2F5 836 aa21.26■□□□□ 0.99
HMGCS1-206ENST00000511774 LTB4R2Q9NPC1 389 aa21.26■□□□□ 0.99
HMGCS1-206ENST00000511774 CDH7Q9ULB5 785 aa21.26■□□□□ 0.99
HMGCS1-206ENST00000511774 PCDHGA2Q9Y5H1 932 aa21.26■□□□□ 0.99
HMGCS1-206ENST00000511774 CYP3A7-CYP3A51PA0A087WV96 503 aa21.25■□□□□ 0.99
HMGCS1-206ENST00000511774 TSPAN1O60635 241 aa21.25■□□□□ 0.99
HMGCS1-206ENST00000511774 C1RP00736 705 aa21.25■□□□□ 0.99
HMGCS1-206ENST00000511774 CYP3A7P24462 503 aa21.25■□□□□ 0.99
HMGCS1-206ENST00000511774 PSMC5P62195 406 aa21.25■□□□□ 0.99
HMGCS1-206ENST00000511774 RTP2Q5QGT7 225 aa21.25■□□□□ 0.99
HMGCS1-206ENST00000511774 POTEHQ6S545 545 aa21.25■□□□□ 0.99
HMGCS1-206ENST00000511774 BICD2Q8TD16 824 aa21.25■□□□□ 0.99
HMGCS1-206ENST00000511774 FGF13Q92913 245 aa21.25■□□□□ 0.99
HMGCS1-206ENST00000511774 KXD1Q9BQD3 176 aa21.25■□□□□ 0.99
HMGCS1-206ENST00000511774 PAAF1Q9BRP4 392 aa21.25■□□□□ 0.99
HMGCS1-206ENST00000511774 APOL6Q9BWW8 343 aa21.25■□□□□ 0.99
HMGCS1-206ENST00000511774 BCO2Q9BYV7 579 aa21.25■□□□□ 0.99
HMGCS1-206ENST00000511774 NXF3Q9H4D5 531 aaKnown RBP21.25■□□□□ 0.99
HMGCS1-206ENST00000511774 FBXW11Q9UKB1 542 aa21.25■□□□□ 0.99
HMGCS1-206ENST00000511774 TARSP26639 723 aaKnown RBP21.24■□□□□ 0.99
HMGCS1-206ENST00000511774 FZD5Q13467 585 aa21.24■□□□□ 0.99
HMGCS1-206ENST00000511774 USP41Q3LFD5 358 aa21.24■□□□□ 0.99
HMGCS1-206ENST00000511774 RNF20Q5VTR2 975 aa21.24■□□□□ 0.99
HMGCS1-206ENST00000511774 RNF149Q8NC42 400 aa21.24■□□□□ 0.99
HMGCS1-206ENST00000511774 PSPC1Q8WXF1 523 aaKnown RBP21.24■□□□□ 0.99
HMGCS1-206ENST00000511774 UBN1Q9NPG3 1134 aa21.24■□□□□ 0.99
HMGCS1-206ENST00000511774 ZSCAN32Q9NX65 697 aa21.24■□□□□ 0.99
HMGCS1-206ENST00000511774 ZBTB39O15060 712 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 ADAM12O43184 909 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 SLC37A4O43826 429 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 PRKCQQ04759 706 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 AMHR2Q16671 573 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 Q6ZUG5 572 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 CNNM3Q8NE01 707 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 ATRIPQ8WXE1 791 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 BRF1Q92994 677 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 CLDN23Q96B33 292 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 CEP170P1Q96L14 293 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 CLSTN3Q9BQT9 956 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 JPH2Q9BR39 696 aaPredicted RBP21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 COLEC11Q9BWP8 271 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 SLC26A6Q9BXS9 759 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 OSBPL6Q9BZF3 934 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 ADAM28Q9UKQ2 775 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 VAV3Q9UKW4 847 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 CDV3Q9UKY7 258 aaKnown RBP21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 ZFP37Q9Y6Q3 630 aaPredicted RBP21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 CEP295Q9C0D2 2601 aa21.23■□□□□ 0.99
HMGCS1-206ENST00000511774 CCDC196A0A1B0GTZ2 297 aa21.22■□□□□ 0.99
HMGCS1-206ENST00000511774 M0R2N6 131 aa21.22■□□□□ 0.99
HMGCS1-206ENST00000511774 CCL16O15467 120 aa21.22■□□□□ 0.99
HMGCS1-206ENST00000511774 AKAP5P24588 427 aa21.22■□□□□ 0.99
HMGCS1-206ENST00000511774 NPY5RQ15761 445 aa21.22■□□□□ 0.99
HMGCS1-206ENST00000511774 FERMT3Q86UX7 667 aa21.22■□□□□ 0.99
HMGCS1-206ENST00000511774 CDR2LQ86X02 465 aaPredicted RBP21.22■□□□□ 0.99
HMGCS1-206ENST00000511774 GPR65Q8IYL9 337 aa21.22■□□□□ 0.99
HMGCS1-206ENST00000511774 CCDC148Q8NFR7 591 aa21.22■□□□□ 0.99
HMGCS1-206ENST00000511774 SLC7A3Q8WY07 619 aa21.22■□□□□ 0.99
HMGCS1-206ENST00000511774 HCFC1R1Q9NWW0 138 aa21.22■□□□□ 0.99
HMGCS1-206ENST00000511774 FRYQ5TBA9 3013 aa21.21■□□□□ 0.99
HMGCS1-206ENST00000511774 BAHCC1Q9P281 2608 aa21.21■□□□□ 0.99
HMGCS1-206ENST00000511774 QARSP47897 775 aaKnown RBP21.21■□□□□ 0.99
HMGCS1-206ENST00000511774 LMNB2Q03252 620 aa21.21■□□□□ 0.99
HMGCS1-206ENST00000511774 EMC2Q15006 297 aa21.21■□□□□ 0.99
HMGCS1-206ENST00000511774 HASPINQ8TF76 798 aa21.21■□□□□ 0.99
HMGCS1-206ENST00000511774 RNF26Q9BY78 433 aaPredicted RBP21.21■□□□□ 0.99
HMGCS1-206ENST00000511774 PLA2G2FQ9BZM2 168 aa21.21■□□□□ 0.99
HMGCS1-206ENST00000511774 CSRNP2Q9H175 543 aa21.21■□□□□ 0.99
HMGCS1-206ENST00000511774 NCOA5Q9HCD5 579 aaKnown RBP21.21■□□□□ 0.99
HMGCS1-206ENST00000511774 XPNPEP1Q9NQW7 623 aa21.21■□□□□ 0.99
HMGCS1-206ENST00000511774 PRMT8Q9NR22 394 aaPredicted RBP21.21■□□□□ 0.99
HMGCS1-206ENST00000511774 KLK14Q9P0G3 267 aa21.21■□□□□ 0.99
HMGCS1-206ENST00000511774 USP18Q9UMW8 372 aa21.21■□□□□ 0.99
HMGCS1-206ENST00000511774 PRR5-ARHGAP8B1AHC4 643 aa21.2■□□□□ 0.98
HMGCS1-206ENST00000511774 B4GALT5O43286 388 aa21.2■□□□□ 0.98
HMGCS1-206ENST00000511774 ERLIN2O94905 339 aa21.2■□□□□ 0.98
HMGCS1-206ENST00000511774 ADRB1P08588 477 aa21.2■□□□□ 0.98
HMGCS1-206ENST00000511774 TDGF1P13385 188 aa21.2■□□□□ 0.98
HMGCS1-206ENST00000511774 PTENP60484 403 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms