RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 FAM160A2Q8N612 972 aaPredicted RBP13.48□□□□□ -0.25
COPS4-210ENST00000511708 DNASE1L2Q92874 299 aa13.48□□□□□ -0.25
COPS4-210ENST00000511708 LSM14BQ9BX40 385 aaKnown RBP13.48□□□□□ -0.25
COPS4-210ENST00000511708 GPR62Q9BZJ7 368 aa13.48□□□□□ -0.25
COPS4-210ENST00000511708 LNPKQ9C0E8 428 aa13.48□□□□□ -0.25
COPS4-210ENST00000511708 PDCD11Q14690 1871 aaKnown RBP13.48□□□□□ -0.25
COPS4-210ENST00000511708 VWA8A3KMH1 1905 aa13.47□□□□□ -0.25
COPS4-210ENST00000511708 SRRM3A6NNA2 597 aaPredicted RBP13.47□□□□□ -0.25
COPS4-210ENST00000511708 CHURC1-FNTBB4DL54 471 aa13.47□□□□□ -0.25
COPS4-210ENST00000511708 MAN2B1O00754 1011 aa13.47□□□□□ -0.25
COPS4-210ENST00000511708 NCLP19338 710 aaKnown RBP13.47□□□□□ -0.25
COPS4-210ENST00000511708 RXRAP19793 462 aa13.47□□□□□ -0.25
COPS4-210ENST00000511708 FNTBP49356 437 aa13.47□□□□□ -0.25
COPS4-210ENST00000511708 SATB1Q01826 763 aa13.47□□□□□ -0.25
COPS4-210ENST00000511708 CREMQ03060 361 aa13.47□□□□□ -0.25
COPS4-210ENST00000511708 GAS6Q14393 721 aa13.47□□□□□ -0.25
COPS4-210ENST00000511708 SF3A2Q15428 464 aaKnown RBP13.47□□□□□ -0.25
COPS4-210ENST00000511708 USP41Q3LFD5 358 aa13.47□□□□□ -0.25
COPS4-210ENST00000511708 STPG1Q5TH74 334 aa13.47□□□□□ -0.25
COPS4-210ENST00000511708 FUT10Q6P4F1 479 aa13.47□□□□□ -0.25
COPS4-210ENST00000511708 TMTC3Q6ZXV5 915 aa13.47□□□□□ -0.25
COPS4-210ENST00000511708 PLEKHM2Q8IWE5 1019 aa13.47□□□□□ -0.25
COPS4-210ENST00000511708 CCDC82Q8N4S0 544 aa13.47□□□□□ -0.25
COPS4-210ENST00000511708 MTA3Q9BTC8 594 aa13.47□□□□□ -0.25
COPS4-210ENST00000511708 KCNH3Q9ULD8 1083 aa13.47□□□□□ -0.25
COPS4-210ENST00000511708 NDRG2Q9UN36 371 aaKnown RBP13.47□□□□□ -0.25
COPS4-210ENST00000511708 MAST4O15021 2626 aa13.46□□□□□ -0.25
COPS4-210ENST00000511708 WDR64B1ANS9 1081 aa13.46□□□□□ -0.25
COPS4-210ENST00000511708 PAPSS2O95340 614 aaPredicted RBP13.46□□□□□ -0.25
COPS4-210ENST00000511708 ZNF806P0C7X5 589 aa13.46□□□□□ -0.25
COPS4-210ENST00000511708 HOXA11P31270 313 aaPredicted RBP13.46□□□□□ -0.25
COPS4-210ENST00000511708 CXCL12P48061 93 aa13.46□□□□□ -0.25
COPS4-210ENST00000511708 ADCY7P51828 1080 aa13.46□□□□□ -0.25
COPS4-210ENST00000511708 NAPAP54920 295 aa13.46□□□□□ -0.25
COPS4-210ENST00000511708 SETQ01105 290 aaPredicted RBP13.46□□□□□ -0.25
COPS4-210ENST00000511708 RING1Q06587 406 aa13.46□□□□□ -0.25
COPS4-210ENST00000511708 POTEHQ6S545 545 aa13.46□□□□□ -0.25
COPS4-210ENST00000511708 SMG8Q8ND04 991 aaKnown RBP13.46□□□□□ -0.25
COPS4-210ENST00000511708 NIFKQ9BYG3 293 aaKnown RBP13.46□□□□□ -0.25
COPS4-210ENST00000511708 LMAN1LQ9HAT1 526 aa13.46□□□□□ -0.25
COPS4-210ENST00000511708 IFT122Q9HBG6 1241 aa13.46□□□□□ -0.25
COPS4-210ENST00000511708 MIOSQ9NXC5 875 aa13.46□□□□□ -0.25
COPS4-210ENST00000511708 LHX6Q9UPM6 363 aa13.46□□□□□ -0.25
COPS4-210ENST00000511708 SAMM50Q9Y512 469 aa13.46□□□□□ -0.25
COPS4-210ENST00000511708 ARL5CA6NH57 179 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 K7ESF4 209 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 TAF4O00268 1085 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 CCL16O15467 120 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 STBD1O95210 358 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 C8AP07357 584 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 CALM1P0DP23 149 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 CALM2P0DP24 149 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 CALM3P0DP25 149 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 DNM2P50570 870 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 PTH1RQ03431 593 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 HDAC1Q13547 482 aaPredicted RBP13.45□□□□□ -0.26
COPS4-210ENST00000511708 PPM1LQ5SGD2 360 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 LIN9Q5TKA1 542 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 LONP2Q86WA8 852 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 RHPN2Q8IUC4 686 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 KSR1Q8IVT5 923 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 GATA6Q92908 595 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 COLEC11Q9BWP8 271 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 UBN1Q9NPG3 1134 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 DISC1Q9NRI5 854 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 HCFC1R1Q9NWW0 138 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 SUCLA2Q9P2R7 463 aaPredicted RBP13.45□□□□□ -0.26
COPS4-210ENST00000511708 DNMT3BQ9UBC3 853 aaKnown RBP13.45□□□□□ -0.26
COPS4-210ENST00000511708 TCEAL9Q9UHQ7 104 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 FREM2Q5SZK8 3169 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 LAMA5O15230 3695 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 EML5Q05BV3 1969 aa13.45□□□□□ -0.26
COPS4-210ENST00000511708 CNTNAP5Q8WYK1 1306 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 SMCO2A6NFE2 343 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 SH2B2O14492 632 aaPredicted RBP13.44□□□□□ -0.26
COPS4-210ENST00000511708 XYLBO75191 536 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 CHRNB1P11230 501 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 FCARP24071 287 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 RTP2Q5QGT7 225 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 TANGO2Q6ICL3 276 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 PSAPL1Q6NUJ1 521 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 PRSS55Q6UWB4 352 aaPredicted RBP13.44□□□□□ -0.26
COPS4-210ENST00000511708 TMTC2Q8N394 836 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 SPEM1Q8N4L4 309 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 C12orf50Q8NA57 414 aaPredicted RBP13.44□□□□□ -0.26
COPS4-210ENST00000511708 CNNM3Q8NE01 707 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 LENG9Q96B70 501 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 ELSPBP1Q96BH3 223 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 GAD1Q99259 594 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 CLSTN3Q9BQT9 956 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 ADAM33Q9BZ11 813 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 GLT8D2Q9H1C3 349 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 TRPV5Q9NQA5 729 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 GDE1Q9NZC3 331 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 ADAM28Q9UKQ2 775 aa13.44□□□□□ -0.26
COPS4-210ENST00000511708 ADAMTS20P59510 1910 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 CCDC69A6NI79 296 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 MAFO75444 373 aaPredicted RBP13.43□□□□□ -0.26
COPS4-210ENST00000511708 ITGA4P13612 1032 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms