RNA–Protein interactions for RNA: ENST00000511649.5

RAB28-207, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-207ENST00000511649 ERVK-21P61565 698 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 MRPS5P82675 430 aaKnown RBP7.4□□□□□ -1.22
RAB28-207ENST00000511649 HTRA4P83105 476 aaPredicted RBP7.4□□□□□ -1.22
RAB28-207ENST00000511649 SP4Q02446 784 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 MGAT3Q09327 533 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 WTAPQ15007 396 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 RSPO4Q2I0M5 234 aaPredicted RBP7.4□□□□□ -1.22
RAB28-207ENST00000511649 ADCK5Q3MIX3 580 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 PLEKHG4Q58EX7 1191 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 CCDC178Q5BJE1 867 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 NKAPLQ5M9Q1 402 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 MARCH8Q5T0T0 291 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 KRTAP1-3Q8IUG1 177 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 C7orf31Q8N865 590 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 CYP2W1Q8TAV3 490 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 TP53INP1Q96A56 240 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 PGBD1Q96JS3 809 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 TRIM56Q9BRZ2 755 aaKnown RBP7.4□□□□□ -1.22
RAB28-207ENST00000511649 RUSC1Q9BVN2 902 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 SPZ1Q9BXG8 430 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 EPHX3Q9H6B9 360 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 SETD4Q9NVD3 440 aa7.4□□□□□ -1.22
RAB28-207ENST00000511649 PLXNA4Q9HCM2 1894 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 GIPC1O14908 333 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 EDIL3O43854 480 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 PPFIA4O75335 1185 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 NT5C2P49902 561 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 NECTIN1Q15223 517 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 BRDTQ58F21 947 aaPredicted RBP7.39□□□□□ -1.23
RAB28-207ENST00000511649 PCNX4Q63HM2 1172 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 WWC2Q6AWC2 1192 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 METTL7BQ6UX53 244 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 TMTC3Q6ZXV5 915 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 Q8N3U1 123 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 C3orf58Q8NDZ4 430 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 NCOA7Q8NI08 942 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 ATP6V0A1Q93050 837 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 C12orf49Q9H741 205 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 ZFYVE1Q9HBF4 777 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 TECTAO75443 2155 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 EVPLQ92817 2033 aa7.39□□□□□ -1.23
RAB28-207ENST00000511649 DMDP11532 3685 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.38□□□□□ -1.23
RAB28-207ENST00000511649 ABHD14A-ACY1A0A1B0GW23 586 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 C17orf102A2RUQ5 167 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 MBLAC1A4D2B0 266 aaPredicted RBP7.38□□□□□ -1.23
RAB28-207ENST00000511649 RSPH10B2B2RC85 870 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 DDAH1O94760 285 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 RSPH10BP0C881 870 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 ACTN1P12814 892 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 CPA1P15085 419 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 GNA15P30679 374 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 GSTT1P30711 240 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 FGD1P98174 961 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 ITGB3BPQ13352 177 aaPredicted RBP7.38□□□□□ -1.23
RAB28-207ENST00000511649 CAMK1Q14012 370 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 LPIN1Q14693 890 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 UTP14CQ5TAP6 766 aaKnown RBP7.38□□□□□ -1.23
RAB28-207ENST00000511649 CREB3L3Q68CJ9 461 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 MYOCDQ8IZQ8 938 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.38□□□□□ -1.23
RAB28-207ENST00000511649 TRAPPC12Q8WVT3 735 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 UBL7Q96S82 380 aaPredicted RBP7.38□□□□□ -1.23
RAB28-207ENST00000511649 MPHOSPH6Q99547 160 aaKnown RBP7.38□□□□□ -1.23
RAB28-207ENST00000511649 RAD9AQ99638 391 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 KATNAL1Q9BW62 490 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 CEP41Q9BYV8 373 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 EHMT1Q9H9B1 1298 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 AGO3Q9H9G7 860 aaKnown RBP7.38□□□□□ -1.23
RAB28-207ENST00000511649 UBIAD1Q9Y5Z9 338 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 FNDC1Q4ZHG4 1894 aaPredicted RBP7.38□□□□□ -1.23
RAB28-207ENST00000511649 ZDBF2Q9HCK1 2354 aa7.38□□□□□ -1.23
RAB28-207ENST00000511649 MEGF11A6BM72 1044 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 FAM86C2PA6NEL3 165 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 FIBPO43427 364 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 DLGAP3O95886 979 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 CCNE2O96020 404 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 CYP11A1P05108 521 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 CTSBP07858 339 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 ARP10275 920 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 TGFB3P10600 412 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 GHRP10912 638 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 IL9P15248 144 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 MARK3P27448 753 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 GTF2F1P35269 517 aaKnown RBP eCLIP7.37□□□□□ -1.23
RAB28-207ENST00000511649 TCF7P36402 384 aaPredicted RBP7.37□□□□□ -1.23
RAB28-207ENST00000511649 LTBRP36941 435 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 KCNJ6P48051 423 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 GATMP50440 423 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 EXOSC10Q01780 885 aaKnown RBP7.37□□□□□ -1.23
RAB28-207ENST00000511649 DLX2Q07687 328 aaPredicted RBP7.37□□□□□ -1.23
RAB28-207ENST00000511649 POU4F3Q15319 338 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 EPC2Q52LR7 807 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 RALYLQ86SE5 291 aaKnown RBP7.37□□□□□ -1.23
RAB28-207ENST00000511649 RTN4RL1Q86UN2 441 aaPredicted RBP7.37□□□□□ -1.23
RAB28-207ENST00000511649 MICU3Q86XE3 530 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 CRYGNQ8WXF5 182 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 TOP1MTQ969P6 601 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 FRMD6Q96NE9 622 aa7.37□□□□□ -1.23
RAB28-207ENST00000511649 UIMC1Q96RL1 719 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms