RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 CPA5Q8WXQ8 436 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 CALR3Q96L12 384 aaKnown RBP9.62□□□□□ -0.87
NEK1-207ENST00000511633 SUDS3Q9H7L9 328 aaPredicted RBP9.62□□□□□ -0.87
NEK1-207ENST00000511633 CYP26B1Q9NR63 512 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 HACD3Q9P035 362 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 OPHN1O60890 802 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 PPARGP37231 505 aaPredicted RBP9.62□□□□□ -0.87
NEK1-207ENST00000511633 BCAR1P56945 870 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 HDLBPQ00341 1268 aaKnown RBP9.62□□□□□ -0.87
NEK1-207ENST00000511633 ROR1Q01973 937 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.62□□□□□ -0.872e-6■□□□□ 9.9
NEK1-207ENST00000511633 KCNH7Q9NS40 1196 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 HPS5Q9UPZ3 1129 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 TTI1O43156 1089 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 ATP1A1P05023 1023 aaKnown RBP9.62□□□□□ -0.87
NEK1-207ENST00000511633 CDH6P55285 790 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 SEMA3FQ13275 785 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 RFFLQ8WZ73 363 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 SPON2Q9BUD6 331 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 SP110Q9HB58 689 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 OLA1Q9NTK5 396 aaKnown RBP9.62□□□□□ -0.87
NEK1-207ENST00000511633 FBXO28Q9NVF7 368 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 LIMA1Q9UHB6 759 aaKnown RBP9.62□□□□□ -0.87
NEK1-207ENST00000511633 DFFAO00273 331 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 COPEO14579 308 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 RHOBTB3O94955 611 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 SLC25A27O95847 323 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 CETPP11597 493 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 RGS7P49802 495 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 TMEM132DQ14C87 1099 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 ACCSLQ4AC99 568 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 APPL2Q8NEU8 664 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 TNIP3Q96KP6 325 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 WNT8AQ9H1J5 351 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 DDX56Q9NY93 547 aaKnown RBP9.62□□□□□ -0.87
NEK1-207ENST00000511633 PPME1Q9Y570 386 aa9.62□□□□□ -0.87
NEK1-207ENST00000511633 KBTBD13C9JR72 458 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 HSPA4LO95757 839 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 NFIAQ12857 509 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 TRIM59Q8IWR1 403 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 PDZD8Q8NEN9 1154 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 SPDL1Q96EA4 605 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 MAP3K20Q9NYL2 800 aaKnown RBP9.61□□□□□ -0.87
NEK1-207ENST00000511633 APEX2Q9UBZ4 518 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 HMGB1P1B2RPK0 211 aaPredicted RBP9.61□□□□□ -0.87
NEK1-207ENST00000511633 NEMP1O14524 444 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 KRT14P02533 472 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 APOEP02649 317 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 FMO5P49326 533 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 HABP4Q5JVS0 413 aaKnown RBP9.61□□□□□ -0.87
NEK1-207ENST00000511633 FRA10AC1Q70Z53 315 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 ZC3H18Q86VM9 953 aaKnown RBP9.61□□□□□ -0.87
NEK1-207ENST00000511633 SPATA2LQ8IUW3 424 aaPredicted RBP9.61□□□□□ -0.87
NEK1-207ENST00000511633 ANKRD13AQ8IZ07 590 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 ACER1Q8TDN7 264 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 PPWD1Q96BP3 646 aaKnown RBP9.61□□□□□ -0.87
NEK1-207ENST00000511633 KATNAL1Q9BW62 490 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.61□□□□□ -0.87
NEK1-207ENST00000511633 RASA4BC9J798 803 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 UBE2Q2LH0YL09 131 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 GSTA4O15217 222 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 RASA4O43374 803 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 RTN2O75298 545 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 UPP2O95045 317 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 SCP2P22307 547 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 PAPOLAP51003 745 aaKnown RBP9.61□□□□□ -0.87
NEK1-207ENST00000511633 GYS2P54840 703 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 RPS6P62753 249 aaKnown RBP9.61□□□□□ -0.87
NEK1-207ENST00000511633 NCOA4Q13772 614 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 ATG16L1Q676U5 607 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 EFCAB12Q6NXP0 572 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 TTC30BQ8N4P2 665 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 VPS11Q9H270 941 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 VCX3AQ9NNX9 186 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 MID2Q9UJV3 735 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 CFLARO15519 480 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 EVI5O60447 810 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 PDGFRBP09619 1106 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 NFKBIAP25963 317 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 PMS2P54278 862 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 PPP4CP60510 307 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 NUGGCQ68CJ6 796 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 CCDC137Q6PK04 289 aaKnown RBP9.61□□□□□ -0.87
NEK1-207ENST00000511633 CHST13Q8NET6 341 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 KAZALD1Q96I82 304 aa9.61□□□□□ -0.87
NEK1-207ENST00000511633 H3BRJ5 948 aa9.6□□□□□ -0.87
NEK1-207ENST00000511633 GNGT2O14610 69 aa9.6□□□□□ -0.87
NEK1-207ENST00000511633 TAC1P20366 129 aa9.6□□□□□ -0.87
NEK1-207ENST00000511633 SULT1E1P49888 294 aa9.6□□□□□ -0.87
NEK1-207ENST00000511633 NPEPPSP55786 919 aa9.6□□□□□ -0.87
NEK1-207ENST00000511633 RBP5P82980 135 aa9.6□□□□□ -0.87
NEK1-207ENST00000511633 TMPRSS15P98073 1019 aa9.6□□□□□ -0.87
NEK1-207ENST00000511633 DRP2Q13474 957 aa9.6□□□□□ -0.87
NEK1-207ENST00000511633 TXNRD3Q86VQ6 643 aa9.6□□□□□ -0.87
NEK1-207ENST00000511633 UBE2Q2Q8WVN8 375 aa9.6□□□□□ -0.87
NEK1-207ENST00000511633 SARS2Q9NP81 518 aaKnown RBP9.6□□□□□ -0.87
NEK1-207ENST00000511633 TSR3Q9UJK0 312 aaKnown RBP9.6□□□□□ -0.87
NEK1-207ENST00000511633 KIAA0391O15091 583 aaKnown RBP9.6□□□□□ -0.87
NEK1-207ENST00000511633 CHEK2O96017 543 aa9.6□□□□□ -0.87
NEK1-207ENST00000511633 CHRNA3P32297 505 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms