RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 PANK4Q9NVE7 773 aa7.85□□□□□ -1.15
PDLIM5-215ENST00000511586 LMCD1Q9NZU5 365 aa7.85□□□□□ -1.15
PDLIM5-215ENST00000511586 PARP2Q9UGN5 583 aa7.85□□□□□ -1.15
PDLIM5-215ENST00000511586 TBX20Q9UMR3 447 aa7.85□□□□□ -1.15
PDLIM5-215ENST00000511586 PLAGL2Q9UPG8 496 aa7.85□□□□□ -1.15
PDLIM5-215ENST00000511586 HPSEQ9Y251 543 aa7.85□□□□□ -1.15
PDLIM5-215ENST00000511586 FAM237AA0A1B0GTK4 181 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 FRMD3A2A2Y4 597 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 ARL5CA6NH57 179 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 INPPL1O15357 1258 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 CLDN3O15551 220 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 TOM1L1O75674 476 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 MCF2P10911 925 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 PROZP22891 400 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 AKAP5P24588 427 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 NMT1P30419 496 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 MLH1P40692 756 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 SYKP43405 635 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 ALDH7A1P49419 539 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 LIG4P49917 911 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 AFF1P51825 1210 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 NDUFA8P51970 172 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 BCAR1P56945 870 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 GTF2BQ00403 316 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 KRT17Q04695 432 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 ZNF568Q3ZCX4 644 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 KCNT2Q6UVM3 1135 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 MPZL3Q6UWV2 235 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 ZBTB33Q86T24 672 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 THNSL1Q8IYQ7 743 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 FSIP1Q8NA03 581 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 KLHL23Q8NBE8 558 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 MAFAQ8NHW3 353 aaPredicted RBP7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 MRPS27Q92552 414 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 HVCN1Q96D96 273 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 ZNF558Q96NG5 402 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 FAM193BQ96PV7 902 aaPredicted RBP7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 GAD1Q99259 594 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 CCDC94Q9BW85 323 aaPredicted RBP7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 TRIM9Q9C026 710 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 LMAN2LQ9H0V9 348 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 CDT1Q9H211 546 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 NRDE2Q9H7Z3 1164 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 OLFML3Q9NRN5 406 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 TBC1D13Q9NVG8 400 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 SNTG2Q9NY99 539 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 HCSTQ9UBK5 93 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 SERTAD1Q9UHV2 236 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 PUF60Q9UHX1 559 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 PCDHB13Q9Y5F0 798 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 MTCH2Q9Y6C9 303 aa7.84□□□□□ -1.15
PDLIM5-215ENST00000511586 CDH23Q9H251 3354 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 PVALEFA0A1B0GWK0 134 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 ABLIM1O14639 778 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 HNRNPDLO14979 420 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 GRM6O15303 877 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 ACTN4O43707 911 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 ZC3H11AO75152 810 aaKnown RBP eCLIP7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 FGF18O76093 207 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 RECQL4O94761 1208 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 GCNT3O95395 438 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 POMCP01189 267 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 PIGRP01833 764 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 ALDH2P05091 517 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 ITGB1P05556 798 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 GALTP07902 379 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 PPM1AP35813 382 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 GRM5P41594 1212 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 MATR3P43243 847 aaKnown RBP eCLIP7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 AFMP43652 599 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 YARSP54577 528 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 ASIC1P78348 528 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 PLCB3Q01970 1234 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 UBE3AQ05086 875 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 MCL1Q07820 350 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 COASYQ13057 564 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 ALCAMQ13740 583 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 NOLC1Q14978 699 aaKnown RBP eCLIP7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 NFKBIBQ15653 356 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 KYAT1Q16773 422 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 TPRNQ4KMQ1 711 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 ZC2HC1CQ53FD0 456 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 STXBP4Q6ZWJ1 553 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 ZNF280BQ86YH2 543 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 MAP4K3Q8IVH8 894 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 SPPL3Q8TCT6 385 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 POF1BQ8WVV4 589 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 MRPL38Q96DV4 380 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 PAGE5Q96GU1 130 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 CCDC34Q96HJ3 373 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 ZBTB45Q96K62 511 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 ZFP42Q96MM3 310 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 RPS6KC1Q96S38 1066 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 GBP3Q9H0R5 595 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 ALG13Q9NP73 1137 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 MIOSQ9NXC5 875 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 SPG21Q9NZD8 308 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 KLK14Q9P0G3 267 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 TBC1D7Q9P0N9 293 aa7.83□□□□□ -1.16
PDLIM5-215ENST00000511586 ANKFY1Q9P2R3 1169 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms