RNA–Protein interactions for RNA: ENST00000510741.5

SPOCK3-215, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

APPRIS ALT2 TSL 5 BASIC

Gene SPOCK3, Length 1,963 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-215	ENST00000510741	SGPL1	O95470	568 aa		21.32	■■□□□ 1
SPOCK3-215	ENST00000510741	SPDYC	Q5MJ68	293 aa		21.32	■■□□□ 1
SPOCK3-215	ENST00000510741	DEFB132	Q7Z7B7	95 aa		21.32	■■□□□ 1
SPOCK3-215	ENST00000510741	PIK3R5	Q8WYR1	880 aa		21.32	■■□□□ 1
SPOCK3-215	ENST00000510741	ARL8A	Q96BM9	186 aa		21.32	■■□□□ 1
SPOCK3-215	ENST00000510741	CCDC127	Q96BQ5	260 aa		21.32	■■□□□ 1
SPOCK3-215	ENST00000510741	SAAL1	Q96ER3	474 aa		21.32	■■□□□ 1
SPOCK3-215	ENST00000510741	KREMEN1	Q96MU8	473 aa		21.32	■■□□□ 1
SPOCK3-215	ENST00000510741	PDLIM7	Q9NR12	457 aa		21.32	■■□□□ 1
SPOCK3-215	ENST00000510741	RAB20	Q9NX57	234 aa		21.32	■■□□□ 1
SPOCK3-215	ENST00000510741	RASAL2	Q9UJF2	1139 aa		21.32	■■□□□ 1
SPOCK3-215	ENST00000510741	PPP2R3B	Q9Y5P8	575 aa		21.32	■■□□□ 1
SPOCK3-215	ENST00000510741	RLF	Q13129	1914 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	FZD9	O00144	591 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	STBD1	O95210	358 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	ITGA4	P13612	1032 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	ECHS1	P30084	290 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	GBP1	P32455	592 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	CDR2	Q01850	454 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	PRPF4B	Q13523	1007 aa	Known RBP	21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	XKR3	Q5GH77	459 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	EMC10	Q5UCC4	262 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	SWSAP1	Q6NVH7	229 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	CATSPERG	Q6ZRH7	1159 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	NOP9	Q86U38	636 aa	Known RBP	21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	EFCAB13	Q8IY85	973 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	ZSWIM2	Q8NEG5	633 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	WNK4	Q96J92	1243 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	RUNDC3B	Q96NL0	473 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	CYP26B1	Q9NR63	512 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	HOXC10	Q9NYD6	342 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	CYP39A1	Q9NYL5	469 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	UVRAG	Q9P2Y5	699 aa		21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	SEPT9	Q9UHD8	586 aa	Predicted RBP	21.31	■■□□□ 1
SPOCK3-215	ENST00000510741	ZNF233	A6NK53	670 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	SPATA31C2	B4DYI2	1134 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	ZNF862	O60290	1169 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	CHRNB2	P17787	502 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	IRAK1	P51617	712 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	HMGCS2	P54868	508 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	KDM7A	Q6ZMT4	941 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	HELQ	Q8TDG4	1101 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	KCNN1	Q92952	543 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	BICD1	Q96G01	975 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	ZSWIM1	Q9BR11	485 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	PLAA	Q9Y263	795 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	WDR81	Q562E7	1941 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	HNRNPDL	O14979	420 aa	Known RBP	21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	TTI1	O43156	1089 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	CYP26A1	O43174	497 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	CYP1A2	P05177	515 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	ACTR2	P61160	394 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	DR1	Q01658	176 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	POU5F1	Q01860	360 aa	Known RBP	21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	PRKCE	Q02156	737 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	SEL1L2	Q5TEA6	688 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	DCAF12L1	Q5VU92	463 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	ABHD15	Q6UXT9	468 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	TRMT1L	Q7Z2T5	733 aa	Known RBP	21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	BSND	Q8WZ55	320 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	SEMA4D	Q92854	862 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	ZKSCAN4	Q969J2	545 aa	Predicted RBP	21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	GTF3C4	Q9UKN8	822 aa		21.3	■■□□□ 1
SPOCK3-215	ENST00000510741	CYP11B1	P15538	503 aa		21.29	■■□□□ 1
SPOCK3-215	ENST00000510741	GCNT1	Q02742	428 aa		21.29	■■□□□ 1
SPOCK3-215	ENST00000510741	TMEM132B	Q14DG7	1078 aa		21.29	■■□□□ 1
SPOCK3-215	ENST00000510741	TRADD	Q15628	312 aa		21.29	■■□□□ 1
SPOCK3-215	ENST00000510741	NOL9	Q5SY16	702 aa	Known RBP	21.29	■■□□□ 1
SPOCK3-215	ENST00000510741	RUFY4	Q6ZNE9	571 aa		21.29	■■□□□ 1
SPOCK3-215	ENST00000510741	KAT5	Q92993	513 aa		21.29	■■□□□ 1
SPOCK3-215	ENST00000510741	ATP6V1G3	Q96LB4	118 aa		21.29	■■□□□ 1
SPOCK3-215	ENST00000510741	PCDHB18P	Q96TA0	734 aa		21.29	■■□□□ 1
SPOCK3-215	ENST00000510741	KIFC3	Q9BVG8	833 aa		21.29	■■□□□ 1
SPOCK3-215	ENST00000510741	KRT14	P02533	472 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	SUPT20HL2	P0C7V6	817 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	CHRNA3	P32297	505 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	HSD17B3	P37058	310 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	FMO1	Q01740	532 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	SUPT20HL1	Q3ZLR7	823 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	SLC39A4	Q6P5W5	647 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	ARFGAP2	Q8N6H7	521 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	TSPYL1	Q9H0U9	437 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	POLR3F	Q9H1D9	316 aa	Predicted RBP	21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	ARHGAP28	Q9P2N2	729 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	TULP1	O00294	542 aa	Predicted RBP	21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	EIF3H	O15372	352 aa	Known RBP eCLIP	21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	DAPK3	O43293	454 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	EXTL3	O43909	919 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	MYZAP	P0CAP1	466 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	CTNNA2	P26232	953 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	GNGT1	P63211	74 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	STRN3	Q13033	797 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	SLC47A2	Q86VL8	602 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	CHST13	Q8NET6	341 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	DNER	Q8NFT8	737 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	DHX38	Q92620	1227 aa	Known RBP	21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	A1CF	Q9NQ94	594 aa	Known RBP	21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	KIAA1217	Q5T5P2	1943 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	LOC285556	D6RIA3	1793 aa		21.28	■■□□□ 1
SPOCK3-215	ENST00000510741	PHF2	O75151	1096 aa		21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms