RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 GPR65Q8IYL9 337 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 ELSPBP1Q96BH3 223 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 EVI5LQ96CN4 794 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 PGBD4Q96DM1 585 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 RSAD1Q9HA92 442 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 LY9Q9HBG7 655 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 AGO4Q9HCK5 861 aaKnown RBP12.21□□□□□ -0.45
SNF8-207ENST00000509995 HCFC1R1Q9NWW0 138 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 GDE1Q9NZC3 331 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 F8W810 466 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 SEC24BO95487 1268 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 POMCP01189 267 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 POU2F2P09086 479 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 MX1P20591 662 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 OR1G1P47890 313 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 CREMQ03060 361 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 LRRC32Q14392 662 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 GRM2Q14416 872 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 UBE2SQ16763 222 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 PABPC1LQ4VXU2 614 aaKnown RBP12.2□□□□□ -0.46
SNF8-207ENST00000509995 TANGO2Q6ICL3 276 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 MIS18BP1Q6P0N0 1132 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 COLGALT2Q8IYK4 626 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 IRF7Q92985 503 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 KRT23Q9C075 422 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 CHMP4BQ9H444 224 aaKnown RBP12.2□□□□□ -0.46
SNF8-207ENST00000509995 DCTPP1Q9H773 170 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 PSTPIP2Q9H939 334 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 TRPV5Q9NQA5 729 aa12.2□□□□□ -0.46
SNF8-207ENST00000509995 RBM12Q9NTZ6 932 aaKnown RBP12.2□□□□□ -0.46
SNF8-207ENST00000509995 ZNF462Q96JM2 2506 aa12.19□□□□□ -0.46
SNF8-207ENST00000509995 SPTA1P02549 2419 aa12.19□□□□□ -0.46
SNF8-207ENST00000509995 CNTNAP2Q9UHC6 1331 aa12.19□□□□□ -0.46
SNF8-207ENST00000509995 CCDC192P0DO97 292 aa12.19□□□□□ -0.46
SNF8-207ENST00000509995 FCARP24071 287 aa12.19□□□□□ -0.46
SNF8-207ENST00000509995 FGD1P98174 961 aa12.19□□□□□ -0.46
SNF8-207ENST00000509995 NMIQ13287 307 aaPredicted RBP12.19□□□□□ -0.46
SNF8-207ENST00000509995 USP41Q3LFD5 358 aa12.19□□□□□ -0.46
SNF8-207ENST00000509995 DEFB124Q8NES8 71 aa12.19□□□□□ -0.46
SNF8-207ENST00000509995 MCRS1Q96EZ8 462 aa12.19□□□□□ -0.46
SNF8-207ENST00000509995 ZC3H10Q96K80 434 aaKnown RBP12.19□□□□□ -0.46
SNF8-207ENST00000509995 MKNK1Q9BUB5 465 aa12.19□□□□□ -0.46
SNF8-207ENST00000509995 TRMT61BQ9BVS5 477 aaKnown RBP12.19□□□□□ -0.46
SNF8-207ENST00000509995 GCOM2Q9BZD3 368 aaPredicted RBP12.19□□□□□ -0.46
SNF8-207ENST00000509995 ZNF334Q9HCZ1 680 aaPredicted RBP12.19□□□□□ -0.46
SNF8-207ENST00000509995 PCDHA6Q9UN73 950 aa12.19□□□□□ -0.46
SNF8-207ENST00000509995 MRPS23Q9Y3D9 190 aaKnown RBP12.19□□□□□ -0.46
SNF8-207ENST00000509995 PCDHB2Q9Y5E7 798 aa12.19□□□□□ -0.46
SNF8-207ENST00000509995 PCDHA8Q9Y5H6 950 aa12.19□□□□□ -0.46
SNF8-207ENST00000509995 MAFBQ9Y5Q3 323 aaPredicted RBP12.19□□□□□ -0.46
SNF8-207ENST00000509995 SHROOM3Q8TF72 1996 aa12.19□□□□□ -0.46
SNF8-207ENST00000509995 PLA2G2AP14555 144 aa12.18□□□□□ -0.46
SNF8-207ENST00000509995 CCNE1P24864 410 aa12.18□□□□□ -0.46
SNF8-207ENST00000509995 DSC1Q08554 894 aa12.18□□□□□ -0.46
SNF8-207ENST00000509995 CEP55Q53EZ4 464 aa12.18□□□□□ -0.46
SNF8-207ENST00000509995 FUT10Q6P4F1 479 aa12.18□□□□□ -0.46
SNF8-207ENST00000509995 POTEHQ6S545 545 aa12.18□□□□□ -0.46
SNF8-207ENST00000509995 MAP4K3Q8IVH8 894 aa12.18□□□□□ -0.46
SNF8-207ENST00000509995 RRP36Q96EU6 259 aaKnown RBP12.18□□□□□ -0.46
SNF8-207ENST00000509995 LRIG1Q96JA1 1093 aa12.18□□□□□ -0.46
SNF8-207ENST00000509995 GPR62Q9BZJ7 368 aa12.18□□□□□ -0.46
SNF8-207ENST00000509995 CNNM2Q9H8M5 875 aa12.18□□□□□ -0.46
SNF8-207ENST00000509995 TMEM9BQ9NQ34 198 aa12.18□□□□□ -0.46
SNF8-207ENST00000509995 DNMT3BQ9UBC3 853 aaKnown RBP12.18□□□□□ -0.46
SNF8-207ENST00000509995 SEC63Q9UGP8 760 aaKnown RBP12.18□□□□□ -0.46
SNF8-207ENST00000509995 CFAP46Q8IYW2 2715 aa12.18□□□□□ -0.46
SNF8-207ENST00000509995 CCDC163A0A0D9SF12 145 aa12.17□□□□□ -0.46
SNF8-207ENST00000509995 FAM221BA6H8Z2 402 aa12.17□□□□□ -0.46
SNF8-207ENST00000509995 AKAP3O75969 853 aa12.17□□□□□ -0.46
SNF8-207ENST00000509995 PRB1P04280 392 aa12.17□□□□□ -0.46
SNF8-207ENST00000509995 SLC5A9Q2M3M2 681 aa12.17□□□□□ -0.46
SNF8-207ENST00000509995 WDR44Q5JSH3 913 aa12.17□□□□□ -0.46
SNF8-207ENST00000509995 LARP1BQ659C4 914 aaKnown RBP12.17□□□□□ -0.46
SNF8-207ENST00000509995 MRPL10Q7Z7H8 261 aaKnown RBP12.17□□□□□ -0.46
SNF8-207ENST00000509995 SLC7A14Q8TBB6 771 aa12.17□□□□□ -0.46
SNF8-207ENST00000509995 HNRNPLLQ8WVV9 542 aaKnown RBP12.17□□□□□ -0.46
SNF8-207ENST00000509995 FAM167AQ96KS9 214 aa12.17□□□□□ -0.46
SNF8-207ENST00000509995 SPZ1Q9BXG8 430 aa12.17□□□□□ -0.46
SNF8-207ENST00000509995 ZFP14Q9HCL3 533 aa12.17□□□□□ -0.46
SNF8-207ENST00000509995 VWA8A3KMH1 1905 aa12.16□□□□□ -0.46
SNF8-207ENST00000509995 C1QL1O75973 258 aa12.16□□□□□ -0.46
SNF8-207ENST00000509995 CAVIN2O95810 425 aa12.16□□□□□ -0.46
SNF8-207ENST00000509995 CEBPBP17676 345 aa12.16□□□□□ -0.46
SNF8-207ENST00000509995 GDI1P31150 447 aa12.16□□□□□ -0.46
SNF8-207ENST00000509995 PXNP49023 591 aaPredicted RBP12.16□□□□□ -0.46
SNF8-207ENST00000509995 MFAP1P55081 439 aaKnown RBP12.16□□□□□ -0.46
SNF8-207ENST00000509995 CREB5Q02930 508 aa12.16□□□□□ -0.46
SNF8-207ENST00000509995 SCAPQ12770 1279 aa12.16□□□□□ -0.46
SNF8-207ENST00000509995 DRP2Q13474 957 aa12.16□□□□□ -0.46
SNF8-207ENST00000509995 PLK5Q496M5 336 aa12.16□□□□□ -0.46
SNF8-207ENST00000509995 C1orf228Q6PIY5 440 aa12.16□□□□□ -0.46
SNF8-207ENST00000509995 PRSS55Q6UWB4 352 aaPredicted RBP12.16□□□□□ -0.46
SNF8-207ENST00000509995 CYB5R4Q7L1T6 521 aa12.16□□□□□ -0.46
SNF8-207ENST00000509995 MSANTD3Q96H12 275 aa12.16□□□□□ -0.46
SNF8-207ENST00000509995 SALL3Q9BXA9 1300 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 URB1O60287 2271 aaKnown RBP12.15□□□□□ -0.46
SNF8-207ENST00000509995 A0A087WZ62 844 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 MEIS1O00470 390 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 NRG2O14511 850 aaPredicted RBP12.15□□□□□ -0.46
SNF8-207ENST00000509995 CDX4O14627 284 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms