RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 KRT39Q6A163 491 aa9.82□□□□□ -0.84
SEC24D-209ENST00000509818 RSRC2Q7L4I2 434 aaKnown RBP9.82□□□□□ -0.84
SEC24D-209ENST00000509818 TRAPPC11Q7Z392 1133 aa9.82□□□□□ -0.84
SEC24D-209ENST00000509818 ZSWIM2Q8NEG5 633 aa9.82□□□□□ -0.84
SEC24D-209ENST00000509818 UBE2TQ9NPD8 197 aaPredicted RBP9.82□□□□□ -0.84
SEC24D-209ENST00000509818 HTTP42858 3142 aa9.82□□□□□ -0.84
SEC24D-209ENST00000509818 RBM47A0AV96 593 aaKnown RBP9.81□□□□□ -0.84
SEC24D-209ENST00000509818 LRRIQ3A6PVS8 624 aaPredicted RBP9.81□□□□□ -0.84
SEC24D-209ENST00000509818 ADCY3O60266 1144 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 EVI5O60447 810 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 MOCS3O95396 460 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 GH1P01241 217 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 ATP1A1P05023 1023 aaKnown RBP9.81□□□□□ -0.84
SEC24D-209ENST00000509818 PRLRP16471 622 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 NAP1L1P55209 391 aaKnown RBP9.81□□□□□ -0.84
SEC24D-209ENST00000509818 CHMP4BP1P59074 171 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 KIAA0753Q2KHM9 967 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 PHLDB3Q6NSJ2 640 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 ALKBH5Q6P6C2 394 aaKnown RBP9.81□□□□□ -0.84
SEC24D-209ENST00000509818 DPP9Q86TI2 863 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 GPR161Q8N6U8 529 aaKnown RBP9.81□□□□□ -0.84
SEC24D-209ENST00000509818 PSPC1Q8WXF1 523 aaKnown RBP9.81□□□□□ -0.84
SEC24D-209ENST00000509818 RABGGTAQ92696 567 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 CCDC127Q96BQ5 260 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 FAM213AQ9BRX8 229 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 PDGFCQ9NRA1 345 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 NAGPAQ9UK23 515 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 INTUQ9ULD6 942 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 COQ4Q9Y3A0 265 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 CENPFP49454 3210 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 MCM3APO60318 1980 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 IGKV6-21A0A0C4DH24 114 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 CTAGE15A4D2H0 777 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 TULP2O00295 520 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 ENC1O14682 589 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 CTAGE8P0CG41 777 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 TNFAIP3P21580 790 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 MARK3P27448 753 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 MAPK4P31152 587 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 MFAP3P55082 362 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 CKAP4Q07065 602 aaKnown RBP9.81□□□□□ -0.84
SEC24D-209ENST00000509818 CAPSQ13938 189 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 KIF22Q14807 665 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 PSMD6Q15008 389 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 IFI16Q16666 785 aaKnown RBP9.81□□□□□ -0.84
SEC24D-209ENST00000509818 ARHGAP44Q17R89 818 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 TAPT1Q6NXT6 567 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 MAMDC4Q6UXC1 1216 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 PLEKHH3Q7Z736 793 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 CTAGE6Q86UF2 777 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 CTAGE4Q8IX94 777 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 PRPF31Q8WWY3 499 aaKnown RBP9.81□□□□□ -0.84
SEC24D-209ENST00000509818 COPS5Q92905 334 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 FAM81BQ96LP2 452 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 GPR88Q9GZN0 384 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 SUGCTQ9HAC7 445 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 SLC5A4Q9NY91 659 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 ERAP1Q9NZ08 941 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 AGO2Q9UKV8 859 aaKnown RBP9.81□□□□□ -0.84
SEC24D-209ENST00000509818 PLXNB2O15031 1838 aa9.81□□□□□ -0.84
SEC24D-209ENST00000509818 PLXNA1Q9UIW2 1896 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 TULP1O00294 542 aaPredicted RBP9.8□□□□□ -0.84
SEC24D-209ENST00000509818 FOXN3O00409 490 aaPredicted RBP9.8□□□□□ -0.84
SEC24D-209ENST00000509818 ASAP2O43150 1006 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 ATP8B1O43520 1251 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 CA12O43570 354 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 GPC3P51654 580 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 ARHGAP1Q07960 439 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 LAMTOR4Q0VGL1 99 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 TFDP1Q14186 410 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 GRB14Q14449 540 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 FAM110CQ1W6H9 321 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 ZNF484Q5JVG2 852 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 ZPBP2Q6X784 338 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 GPR142Q7Z601 462 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 ARHGEF19Q8IW93 802 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 ZBTB8OSQ8IWT0 167 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 FBXL13Q8NEE6 735 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 SLC30A5Q8TAD4 765 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 EMID1Q96A84 441 aaPredicted RBP9.8□□□□□ -0.84
SEC24D-209ENST00000509818 RPGRIP1Q96KN7 1286 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 C2orf40Q9H1Z8 148 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 ARGLU1Q9NWB6 273 aaPredicted RBP9.8□□□□□ -0.84
SEC24D-209ENST00000509818 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.8□□□□□ -0.84
SEC24D-209ENST00000509818 PUF60Q9UHX1 559 aaKnown RBP9.8□□□□□ -0.84
SEC24D-209ENST00000509818 NENFQ9UMX5 172 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 TRPC6Q9Y210 931 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 CAPN6Q9Y6Q1 641 aa9.8□□□□□ -0.84
SEC24D-209ENST00000509818 A0A0B4J269 797 aa9.79□□□□□ -0.84
SEC24D-209ENST00000509818 SLC15A5A6NIM6 579 aa9.79□□□□□ -0.84
SEC24D-209ENST00000509818 ZBTB42B2RXF5 422 aa9.79□□□□□ -0.84
SEC24D-209ENST00000509818 DDX3XO00571 662 aaKnown RBP eCLIP9.79□□□□□ -0.842e-7■■□□□ 12.8
SEC24D-209ENST00000509818 ZC3H11AO75152 810 aaKnown RBP eCLIP9.79□□□□□ -0.84
SEC24D-209ENST00000509818 H2AFZP0C0S5 128 aa9.79□□□□□ -0.84
SEC24D-209ENST00000509818 KLRC1P26715 233 aa9.79□□□□□ -0.84
SEC24D-209ENST00000509818 MATR3P43243 847 aaKnown RBP eCLIP9.79□□□□□ -0.842e-6■■■■□ 26.2
SEC24D-209ENST00000509818 CLDN10P78369 228 aa9.79□□□□□ -0.84
SEC24D-209ENST00000509818 IRX5P78411 483 aaPredicted RBP9.79□□□□□ -0.84
SEC24D-209ENST00000509818 CDCA2Q69YH5 1023 aaPredicted RBP9.79□□□□□ -0.84
SEC24D-209ENST00000509818 H2AFVQ71UI9 128 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms