RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 ATXN2Q99700 1313 aaKnown RBP19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 E7EVH7 732 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 ATP9AO75110 1047 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 CNGA1P29973 690 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 ADSSP30520 456 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 PDE6CP51160 858 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 PPP2R2AP63151 447 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 SLC47A2Q86VL8 602 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 PARD3BQ8TEW8 1205 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 MAGOHBQ96A72 148 aaKnown RBP19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 KMT5AQ9NQR1 393 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 PXMP2Q9NR77 195 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 ZDHHC18Q9NUE0 388 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 COL4A5P29400 1685 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 ANKRD63C9JTQ0 380 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 PODXLO00592 558 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 FAM107AO95990 144 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 CCNE2O96020 404 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 NPTX2P47972 431 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 AADACL2Q6P093 401 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 AEBP2Q6ZN18 517 aaPredicted RBP19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 OTUD6AQ7L8S5 288 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 MICALL1Q8N3F8 863 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 RDM1Q8NG50 284 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 MYCBPAPQ8TBZ2 947 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 ZNF564Q8TBZ8 553 aaPredicted RBP19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 KIFAP3Q92845 792 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 C18orf8Q96DM3 657 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 NT5C1BQ96P26 610 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 TXLNGYQ9BZA5 131 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 MTUS1Q9ULD2 1270 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 TRPC6Q9Y210 931 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 SNX24Q9Y343 169 aa19.29■□□□□ 0.68
CCHCR1-228ENST00000509552 DENND3A2RUS2 1198 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 KIAA0391O15091 583 aaKnown RBP19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 SPOPO43791 374 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 MMEP08473 750 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 CTNNA2P26232 953 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 MARCKSL1P49006 195 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 PEX5P50542 639 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 GPC3P51654 580 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 CDR1P51861 262 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 SEC24CP53992 1094 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 PLTPP55058 493 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 FMO1Q01740 532 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 NSMFQ6X4W1 530 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 HOOK3Q86VS8 718 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 FBXL13Q8NEE6 735 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 SEMA4DQ92854 862 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 RUNDC3BQ96NL0 473 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 PAGR1Q9BTK6 254 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 NUP85Q9BW27 656 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 MYOZ2Q9NPC6 264 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 PPANQ9NQ55 473 aaKnown RBP19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 GINM1Q9NU53 330 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 PARP2Q9UGN5 583 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 PCYOX1Q9UHG3 505 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 SLC12A6Q9UHW9 1150 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 GTF3C4Q9UKN8 822 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 COQ4Q9Y3A0 265 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 GOLGB1Q14789 3259 aaKnown RBP19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 CYP1A2P05177 515 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 CYP11B1P15538 503 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 PMS2P54278 862 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 CDR2Q01850 454 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 NLRX1Q86UT6 975 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 PRELID2Q8N945 189 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 TMC2Q8TDI7 906 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 ZNF653Q96CK0 615 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 MOV10L1Q9BXT6 1211 aaKnown RBP19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 UVRAGQ9P2Y5 699 aa19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 CHORDC1Q9UHD1 332 aaPredicted RBP19.28■□□□□ 0.68
CCHCR1-228ENST00000509552 ATMINO43313 823 aaPredicted RBP19.27■□□□□ 0.68
CCHCR1-228ENST00000509552 CPP00450 1065 aa19.27■□□□□ 0.68
CCHCR1-228ENST00000509552 GTF2H1P32780 548 aa19.27■□□□□ 0.68
CCHCR1-228ENST00000509552 PTGIRP43119 386 aa19.27■□□□□ 0.68
CCHCR1-228ENST00000509552 TNFAIP1Q13829 316 aa19.27■□□□□ 0.68
CCHCR1-228ENST00000509552 XRRA1Q6P2D8 792 aa19.27■□□□□ 0.68
CCHCR1-228ENST00000509552 C17orf75Q9HAS0 396 aa19.27■□□□□ 0.68
CCHCR1-228ENST00000509552 RAB20Q9NX57 234 aa19.27■□□□□ 0.68
CCHCR1-228ENST00000509552 PCDHA10Q9Y5I2 948 aa19.27■□□□□ 0.68
CCHCR1-228ENST00000509552 FDX1P10109 184 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 MAGOHP61326 146 aaKnown RBP19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 CXCL9Q07325 125 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 DGKZQ13574 1117 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 CCDC137Q6PK04 289 aaKnown RBP19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 ANO5Q75V66 913 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 HELQQ8TDG4 1101 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 SPIRE2Q8WWL2 714 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 POMGNT1Q8WZA1 660 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 CD101Q93033 1021 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 KIFC3Q9BVG8 833 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 PABPC3Q9H361 631 aaKnown RBP19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 ACP6Q9NPH0 428 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 MTRF1LQ9UGC7 380 aaKnown RBP19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 SCAF8Q9UPN6 1271 aaKnown RBP19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 GMNCA6NCL1 334 aa19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 CTNND1O60716 968 aaKnown RBP19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 DKC1O60832 514 aaKnown RBP eCLIP19.26■□□□□ 0.67
CCHCR1-228ENST00000509552 CCND2P30279 289 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms