RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 MSL3Q8N5Y2 521 aaKnown RBP4.49□□□□□ -1.69
OTUD4-207ENST00000509517 ANKRD53Q8N9V6 530 aa4.49□□□□□ -1.69
OTUD4-207ENST00000509517 SHCBP1Q8NEM2 672 aa4.49□□□□□ -1.69
OTUD4-207ENST00000509517 RPL10LQ96L21 214 aaKnown RBP4.49□□□□□ -1.69
OTUD4-207ENST00000509517 GPHA2Q96T91 129 aa4.49□□□□□ -1.69
OTUD4-207ENST00000509517 PLA2G12BQ9BX93 195 aa4.49□□□□□ -1.69
OTUD4-207ENST00000509517 AGO3Q9H9G7 860 aaKnown RBP4.49□□□□□ -1.69
OTUD4-207ENST00000509517 IFT122Q9HBG6 1241 aa4.49□□□□□ -1.69
OTUD4-207ENST00000509517 ZNF277Q9NRM2 450 aaPredicted RBP4.49□□□□□ -1.69
OTUD4-207ENST00000509517 REXO2Q9Y3B8 237 aaKnown RBP4.49□□□□□ -1.69
OTUD4-207ENST00000509517 GPR45Q9Y5Y3 372 aa4.49□□□□□ -1.69
OTUD4-207ENST00000509517 ALDH1A2O94788 518 aa4.48□□□□□ -1.69
OTUD4-207ENST00000509517 CFBP00751 764 aa4.48□□□□□ -1.69
OTUD4-207ENST00000509517 JUNP05412 331 aaKnown RBP4.48□□□□□ -1.69
OTUD4-207ENST00000509517 LTA4HP09960 611 aaKnown RBP4.48□□□□□ -1.69
OTUD4-207ENST00000509517 MYBL2P10244 700 aa4.48□□□□□ -1.69
OTUD4-207ENST00000509517 RBP3P10745 1247 aa4.48□□□□□ -1.69
OTUD4-207ENST00000509517 OSMP13725 252 aa4.48□□□□□ -1.69
OTUD4-207ENST00000509517 AGXTP21549 392 aa4.48□□□□□ -1.69
OTUD4-207ENST00000509517 HIBADHP31937 336 aaKnown RBP4.48□□□□□ -1.69
OTUD4-207ENST00000509517 CCT2P78371 535 aaKnown RBP4.48□□□□□ -1.69
OTUD4-207ENST00000509517 MRPS21P82921 87 aaKnown RBP4.48□□□□□ -1.69
OTUD4-207ENST00000509517 EXOSC10Q01780 885 aaKnown RBP4.48□□□□□ -1.69
OTUD4-207ENST00000509517 MEF2AQ02078 507 aaPredicted RBP4.48□□□□□ -1.69
OTUD4-207ENST00000509517 ADRM1Q16186 407 aa4.48□□□□□ -1.69
OTUD4-207ENST00000509517 MBNL2Q5VZF2 373 aaKnown RBP4.48□□□□□ -1.69
OTUD4-207ENST00000509517 KRT40Q6A162 431 aa4.48□□□□□ -1.69
OTUD4-207ENST00000509517 ADGRE4PQ86SQ3 457 aa4.48□□□□□ -1.69
OTUD4-207ENST00000509517 STAG1Q8WVM7 1258 aa4.48□□□□□ -1.69
OTUD4-207ENST00000509517 SMAD5Q99717 465 aaKnown RBP4.48□□□□□ -1.69
OTUD4-207ENST00000509517 ACE2Q9BYF1 805 aaPredicted RBP4.48□□□□□ -1.69
OTUD4-207ENST00000509517 ZNF703Q9H7S9 590 aaPredicted RBP4.48□□□□□ -1.69
OTUD4-207ENST00000509517 ING3Q9NXR8 418 aa4.48□□□□□ -1.69
OTUD4-207ENST00000509517 DDX56Q9NY93 547 aaKnown RBP4.48□□□□□ -1.69
OTUD4-207ENST00000509517 TNKSO95271 1327 aa4.47□□□□□ -1.69
OTUD4-207ENST00000509517 SHTN1A0MZ66 631 aa4.47□□□□□ -1.69
OTUD4-207ENST00000509517 RPS19P39019 145 aaKnown RBP4.47□□□□□ -1.69
OTUD4-207ENST00000509517 SLC5A3P53794 718 aa4.47□□□□□ -1.69
OTUD4-207ENST00000509517 KRT85P78386 507 aa4.47□□□□□ -1.69
OTUD4-207ENST00000509517 UBE3CQ15386 1083 aa4.47□□□□□ -1.69
OTUD4-207ENST00000509517 CLUL1Q15846 466 aa4.47□□□□□ -1.69
OTUD4-207ENST00000509517 ANO4Q32M45 955 aa4.47□□□□□ -1.69
OTUD4-207ENST00000509517 PGM2L1Q6PCE3 622 aa4.47□□□□□ -1.69
OTUD4-207ENST00000509517 BTNL9Q6UXG8 535 aa4.47□□□□□ -1.69
OTUD4-207ENST00000509517 ABHD15Q6UXT9 468 aa4.47□□□□□ -1.69
OTUD4-207ENST00000509517 GLB1L3Q8NCI6 653 aaPredicted RBP4.47□□□□□ -1.69
OTUD4-207ENST00000509517 SSH1Q8WYL5 1049 aa4.47□□□□□ -1.69
OTUD4-207ENST00000509517 FAM89AQ96GI7 184 aa4.47□□□□□ -1.69
OTUD4-207ENST00000509517 FUBP3Q96I24 572 aaKnown RBP eCLIP4.47□□□□□ -1.69
OTUD4-207ENST00000509517 FAXDC2Q96IV6 333 aa4.47□□□□□ -1.69
OTUD4-207ENST00000509517 PAWRQ96IZ0 340 aaKnown RBP4.47□□□□□ -1.69
OTUD4-207ENST00000509517 NELFAQ9H3P2 528 aa4.47□□□□□ -1.69
OTUD4-207ENST00000509517 TLR9Q9NR96 1032 aa4.47□□□□□ -1.69
OTUD4-207ENST00000509517 MKS1Q9NXB0 559 aa4.47□□□□□ -1.69
OTUD4-207ENST00000509517 SCOCQ9UIL1 159 aa4.47□□□□□ -1.69
OTUD4-207ENST00000509517 A0A1W2PRX2 142 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 PCDHGA12O60330 932 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 PRAMEF4O60810 478 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 PDGFRBP09619 1106 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 CTSSP25774 331 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 WNT3AP56704 352 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 KRTAP10-7P60409 375 aaPredicted RBP4.46□□□□□ -1.7
OTUD4-207ENST00000509517 PCBP2Q15366 365 aaKnown RBP eCLIP4.46□□□□□ -1.7
OTUD4-207ENST00000509517 C19orf54Q5BKX5 351 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 ZKSCAN2Q63HK3 967 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 LAIR1Q6GTX8 287 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 CMTM4Q8IZR5 234 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 SNX33Q8WV41 574 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 JADE3Q92613 823 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 FATE1Q969F0 183 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 PRRX2Q99811 253 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 SLC13A1Q9BZW2 595 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 ENKD1Q9H0I2 346 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 IL23AQ9NPF7 189 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 SPEF1Q9Y4P9 236 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 PCDHGA9Q9Y5G4 932 aaKnown RBP4.46□□□□□ -1.7
OTUD4-207ENST00000509517 PCDHGA8Q9Y5G5 932 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 PCDHGA7Q9Y5G6 932 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 PCDHGA6Q9Y5G7 932 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 PCDHGA3Q9Y5H0 932 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 PCDHGA2Q9Y5H1 932 aa4.46□□□□□ -1.7
OTUD4-207ENST00000509517 UBE2QL1A1L167 161 aa4.45□□□□□ -1.7
OTUD4-207ENST00000509517 NRP1O14786 923 aa4.45□□□□□ -1.7
OTUD4-207ENST00000509517 MSX2P35548 267 aaPredicted RBP4.45□□□□□ -1.7
OTUD4-207ENST00000509517 SLC25A3Q00325 362 aa4.45□□□□□ -1.7
OTUD4-207ENST00000509517 MALLQ13021 153 aa4.45□□□□□ -1.7
OTUD4-207ENST00000509517 GRM7Q14831 915 aa4.45□□□□□ -1.7
OTUD4-207ENST00000509517 PTPN21Q16825 1174 aa4.45□□□□□ -1.7
OTUD4-207ENST00000509517 MUM1L1Q5H9M0 696 aa4.45□□□□□ -1.7
OTUD4-207ENST00000509517 COLEC12Q5KU26 742 aa4.45□□□□□ -1.7
OTUD4-207ENST00000509517 LILRA3Q8N6C8 439 aaPredicted RBP4.45□□□□□ -1.7
OTUD4-207ENST00000509517 RIN2Q8WYP3 895 aaPredicted RBP4.45□□□□□ -1.7
OTUD4-207ENST00000509517 SLC2A13Q96QE2 648 aa4.45□□□□□ -1.7
OTUD4-207ENST00000509517 GREM2Q9H772 168 aa4.45□□□□□ -1.7
OTUD4-207ENST00000509517 DMRT3Q9NQL9 472 aa4.45□□□□□ -1.7
OTUD4-207ENST00000509517 PLA2G3Q9NZ20 509 aa4.45□□□□□ -1.7
OTUD4-207ENST00000509517 NCDNQ9UBB6 729 aa4.45□□□□□ -1.7
OTUD4-207ENST00000509517 RCAN3Q9UKA8 241 aa4.45□□□□□ -1.7
OTUD4-207ENST00000509517 KLHL33A6NCF5 533 aa4.44□□□□□ -1.7
OTUD4-207ENST00000509517 MASP2O00187 686 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms