RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 LZTS2Q9BRK4 669 aa15.34■□□□□ 0.05
HMGCR-208ENST00000509431 DSCC1Q9BVC3 393 aa15.34■□□□□ 0.05
HMGCR-208ENST00000509431 COLEC11Q9BWP8 271 aa15.34■□□□□ 0.05
HMGCR-208ENST00000509431 COL4A2P08572 1712 aa15.34■□□□□ 0.05
HMGCR-208ENST00000509431 C4orf47A7E2U8 309 aa15.33■□□□□ 0.04
HMGCR-208ENST00000509431 IFIT3O14879 490 aaKnown RBP15.33■□□□□ 0.04
HMGCR-208ENST00000509431 CCL16O15467 120 aa15.33■□□□□ 0.04
HMGCR-208ENST00000509431 MLLT6P55198 1093 aaPredicted RBP15.33■□□□□ 0.04
HMGCR-208ENST00000509431 DSC1Q08554 894 aa15.33■□□□□ 0.04
HMGCR-208ENST00000509431 ZNF746Q6NUN9 644 aaPredicted RBP15.33■□□□□ 0.04
HMGCR-208ENST00000509431 RTL10Q7L3V2 364 aa15.33■□□□□ 0.04
HMGCR-208ENST00000509431 CATSPER4Q7RTX7 472 aa15.33■□□□□ 0.04
HMGCR-208ENST00000509431 ZNF410Q86VK4 478 aa15.33■□□□□ 0.04
HMGCR-208ENST00000509431 GLIS3Q8NEA6 775 aa15.33■□□□□ 0.04
HMGCR-208ENST00000509431 TRMT61BQ9BVS5 477 aaKnown RBP15.33■□□□□ 0.04
HMGCR-208ENST00000509431 NRBP2Q9NSY0 501 aa15.33■□□□□ 0.04
HMGCR-208ENST00000509431 TCEAL9Q9UHQ7 104 aa15.33■□□□□ 0.04
HMGCR-208ENST00000509431 MRPS23Q9Y3D9 190 aaKnown RBP15.33■□□□□ 0.04
HMGCR-208ENST00000509431 PIAS3Q9Y6X2 628 aa15.33■□□□□ 0.04
HMGCR-208ENST00000509431 IGSF10Q6WRI0 2623 aa15.33■□□□□ 0.04
HMGCR-208ENST00000509431 AKAP13Q12802 2813 aa15.33■□□□□ 0.04
HMGCR-208ENST00000509431 TDRD15B5MCY1 1934 aaKnown RBP15.33■□□□□ 0.04
HMGCR-208ENST00000509431 TICRRQ7Z2Z1 1910 aa15.33■□□□□ 0.04
HMGCR-208ENST00000509431 CCDC163A0A0D9SF12 145 aa15.32■□□□□ 0.04
HMGCR-208ENST00000509431 DHX15O43143 795 aaKnown RBP15.32■□□□□ 0.04
HMGCR-208ENST00000509431 RPP40O75818 363 aaKnown RBP15.32■□□□□ 0.04
HMGCR-208ENST00000509431 AKAP3O75969 853 aa15.32■□□□□ 0.04
HMGCR-208ENST00000509431 FOSP01100 380 aaPredicted RBP15.32■□□□□ 0.04
HMGCR-208ENST00000509431 AFF1P51825 1210 aaKnown RBP15.32■□□□□ 0.04
HMGCR-208ENST00000509431 TRDNQ13061 729 aa15.32■□□□□ 0.04
HMGCR-208ENST00000509431 SART3Q15020 963 aaKnown RBP15.32■□□□□ 0.04
HMGCR-208ENST00000509431 UVSSAQ2YD98 709 aa15.32■□□□□ 0.04
HMGCR-208ENST00000509431 TANGO2Q6ICL3 276 aa15.32■□□□□ 0.04
HMGCR-208ENST00000509431 FUT10Q6P4F1 479 aa15.32■□□□□ 0.04
HMGCR-208ENST00000509431 MAP4K3Q8IVH8 894 aa15.32■□□□□ 0.04
HMGCR-208ENST00000509431 CTCFLQ8NI51 663 aaPredicted RBP15.32■□□□□ 0.04
HMGCR-208ENST00000509431 ADAM32Q8TC27 787 aa15.32■□□□□ 0.04
HMGCR-208ENST00000509431 ZNF334Q9HCZ1 680 aaPredicted RBP15.32■□□□□ 0.04
HMGCR-208ENST00000509431 CACNA2D2Q9NY47 1150 aa15.32■□□□□ 0.04
HMGCR-208ENST00000509431 PCDHA10Q9Y5I2 948 aa15.32■□□□□ 0.04
HMGCR-208ENST00000509431 ITPR1Q14643 2758 aa15.31■□□□□ 0.04
HMGCR-208ENST00000509431 A0A087WZ62 844 aa15.31■□□□□ 0.04
HMGCR-208ENST00000509431 RPL17P18621 184 aaKnown RBP15.31■□□□□ 0.04
HMGCR-208ENST00000509431 GNAQP50148 359 aa15.31■□□□□ 0.04
HMGCR-208ENST00000509431 DGKKQ5KSL6 1271 aa15.31■□□□□ 0.04
HMGCR-208ENST00000509431 C19orf48Q6RUI8 117 aa15.31■□□□□ 0.04
HMGCR-208ENST00000509431 KBTBD6Q86V97 674 aa15.31■□□□□ 0.04
HMGCR-208ENST00000509431 CNNM3Q8NE01 707 aa15.31■□□□□ 0.04
HMGCR-208ENST00000509431 ING5Q8WYH8 240 aa15.31■□□□□ 0.04
HMGCR-208ENST00000509431 MCRS1Q96EZ8 462 aa15.31■□□□□ 0.04
HMGCR-208ENST00000509431 ZC3H10Q96K80 434 aaKnown RBP15.31■□□□□ 0.04
HMGCR-208ENST00000509431 FDXACB1Q9BRP7 624 aaPredicted RBP15.31■□□□□ 0.04
HMGCR-208ENST00000509431 GPR62Q9BZJ7 368 aa15.31■□□□□ 0.04
HMGCR-208ENST00000509431 SMOC1Q9H4F8 434 aa15.31■□□□□ 0.04
HMGCR-208ENST00000509431 ZFP14Q9HCL3 533 aa15.31■□□□□ 0.04
HMGCR-208ENST00000509431 AVENQ9NQS1 362 aaPredicted RBP15.31■□□□□ 0.04
HMGCR-208ENST00000509431 TBC1D22BQ9NU19 505 aa15.31■□□□□ 0.04
HMGCR-208ENST00000509431 AGPAT5Q9NUQ2 364 aa15.31■□□□□ 0.04
HMGCR-208ENST00000509431 GABBR1Q9UBS5 961 aa15.31■□□□□ 0.04
HMGCR-208ENST00000509431 ZBTB47Q9UFB7 747 aaPredicted RBP15.31■□□□□ 0.04
HMGCR-208ENST00000509431 LOC400499M0QZD8 3231 aa15.3■□□□□ 0.04
HMGCR-208ENST00000509431 IPO5O00410 1097 aaKnown RBP15.3■□□□□ 0.04
HMGCR-208ENST00000509431 OATP04181 439 aa15.3■□□□□ 0.04
HMGCR-208ENST00000509431 CCDC192P0DO97 292 aa15.3■□□□□ 0.04
HMGCR-208ENST00000509431 ZNF76P36508 570 aa15.3■□□□□ 0.04
HMGCR-208ENST00000509431 DNM2P50570 870 aa15.3■□□□□ 0.04
HMGCR-208ENST00000509431 GRM2Q14416 872 aa15.3■□□□□ 0.04
HMGCR-208ENST00000509431 PDCD11Q14690 1871 aaKnown RBP15.3■□□□□ 0.04
HMGCR-208ENST00000509431 B3GALT6Q96L58 329 aa15.3■□□□□ 0.04
HMGCR-208ENST00000509431 SMG1Q96Q15 3661 aaKnown RBP15.3■□□□□ 0.04
HMGCR-208ENST00000509431 IGSF5Q9NSI5 407 aa15.3■□□□□ 0.04
HMGCR-208ENST00000509431 DNMT3BQ9UBC3 853 aaKnown RBP15.3■□□□□ 0.04
HMGCR-208ENST00000509431 ADAM28Q9UKQ2 775 aa15.3■□□□□ 0.04
HMGCR-208ENST00000509431 PCNX2A6NKB5 2137 aa15.29■□□□□ 0.04
HMGCR-208ENST00000509431 HYAL3O43820 417 aaPredicted RBP15.29■□□□□ 0.04
HMGCR-208ENST00000509431 CCNE1P24864 410 aa15.29■□□□□ 0.04
HMGCR-208ENST00000509431 PDE1AP54750 535 aa15.29■□□□□ 0.04
HMGCR-208ENST00000509431 COL28A1Q2UY09 1125 aa15.29■□□□□ 0.04
HMGCR-208ENST00000509431 PLA2G4DQ86XP0 818 aa15.29■□□□□ 0.04
HMGCR-208ENST00000509431 SLC7A14Q8TBB6 771 aa15.29■□□□□ 0.04
HMGCR-208ENST00000509431 DEPDC1BQ8WUY9 529 aa15.29■□□□□ 0.04
HMGCR-208ENST00000509431 SENP2Q9HC62 589 aa15.29■□□□□ 0.04
HMGCR-208ENST00000509431 HCFC1R1Q9NWW0 138 aa15.29■□□□□ 0.04
HMGCR-208ENST00000509431 WDFY3Q8IZQ1 3526 aa15.29■□□□□ 0.04
HMGCR-208ENST00000509431 CCER2I3L3R5 266 aa15.28■□□□□ 0.04
HMGCR-208ENST00000509431 DDAH1O94760 285 aa15.28■□□□□ 0.04
HMGCR-208ENST00000509431 ITGA4P13612 1032 aa15.28■□□□□ 0.04
HMGCR-208ENST00000509431 PSMC3P17980 439 aa15.28■□□□□ 0.04
HMGCR-208ENST00000509431 SDSP20132 328 aa15.28■□□□□ 0.04
HMGCR-208ENST00000509431 FCARP24071 287 aa15.28■□□□□ 0.04
HMGCR-208ENST00000509431 GDI1P31150 447 aa15.28■□□□□ 0.04
HMGCR-208ENST00000509431 RDXP35241 583 aaKnown RBP15.28■□□□□ 0.04
HMGCR-208ENST00000509431 SREBF1P36956 1147 aa15.28■□□□□ 0.04
HMGCR-208ENST00000509431 C19orf57Q0VDD7 668 aa15.28■□□□□ 0.04
HMGCR-208ENST00000509431 TCEAL6Q6IPX3 200 aa15.28■□□□□ 0.04
HMGCR-208ENST00000509431 SYNPOQ8N3V7 929 aa15.28■□□□□ 0.04
HMGCR-208ENST00000509431 TCEAL3Q969E4 200 aa15.28■□□□□ 0.04
HMGCR-208ENST00000509431 BBC3Q96PG8 261 aaPredicted RBP15.28■□□□□ 0.04
HMGCR-208ENST00000509431 CLSTN3Q9BQT9 956 aa15.28■□□□□ 0.04
HMGCR-208ENST00000509431 APOL6Q9BWW8 343 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms