RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 F2P00734 622 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 CTNNA1P35221 906 aaKnown RBP5.08□□□□□ -1.6
NIPBL-206ENST00000509429 HTR3AP46098 478 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 ST13P50502 369 aaKnown RBP5.08□□□□□ -1.6
NIPBL-206ENST00000509429 RWDD2BP57060 319 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 GABREP78334 506 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 CTAG1AP78358 180 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 PLIN5Q00G26 463 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 RASA2Q15283 850 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 SHROOM1Q2M3G4 852 aaPredicted RBP5.08□□□□□ -1.6
NIPBL-206ENST00000509429 RILPL1Q5EBL4 403 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 C10orf76Q5T2E6 689 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 CFAP58Q5T655 872 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 TTC19Q6DKK2 380 aaPredicted RBP5.08□□□□□ -1.6
NIPBL-206ENST00000509429 GALNT17Q6IS24 598 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 SLC4A10Q6U841 1118 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 ABRAXAS1Q6UWZ7 409 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 NEK10Q6ZWH5 1172 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 CCDC80Q76M96 950 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 MILR1Q7Z6M3 343 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 SRLQ86TD4 932 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 ZNF354CQ86Y25 554 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 CKAP2LQ8IYA6 745 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 ENAHQ8N8S7 591 aaPredicted RBP5.08□□□□□ -1.6
NIPBL-206ENST00000509429 DHTKD1Q96HY7 919 aaPredicted RBP5.08□□□□□ -1.6
NIPBL-206ENST00000509429 TBATAQ96M53 351 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 HAUS7Q99871 368 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 TACO1Q9BSH4 297 aaKnown RBP5.08□□□□□ -1.6
NIPBL-206ENST00000509429 MRPL9Q9BYD2 267 aaKnown RBP5.08□□□□□ -1.6
NIPBL-206ENST00000509429 DDX21Q9NR30 783 aaKnown RBP eCLIP5.08□□□□□ -1.6
NIPBL-206ENST00000509429 SAGE1Q9NXZ1 904 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 DKK3Q9UBP4 350 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 NOSIPQ9Y314 301 aaKnown RBP5.08□□□□□ -1.6
NIPBL-206ENST00000509429 ATAD2BQ9ULI0 1458 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 ZAR1LA6NP61 321 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 RASA4BC9J798 803 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 SHOXO15266 292 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 RASA4O43374 803 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 P4HBP07237 508 aaKnown RBP5.07□□□□□ -1.6
NIPBL-206ENST00000509429 RPS2P15880 293 aaKnown RBP5.07□□□□□ -1.6
NIPBL-206ENST00000509429 EIF4BP23588 611 aaKnown RBP5.07□□□□□ -1.6
NIPBL-206ENST00000509429 GRK2P25098 689 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 RXRGP48443 463 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 ATP2B2Q01814 1243 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 DEUP1Q05D60 604 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 LRRC74AQ0VAA2 488 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 PPP2R5CQ13362 524 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 ACAP1Q15027 740 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 PDCD2Q16342 344 aaPredicted RBP5.07□□□□□ -1.6
NIPBL-206ENST00000509429 SLC5A9Q2M3M2 681 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 ANKRD39Q53RE8 183 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 SFMBT2Q5VUG0 894 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 OVOS1Q6IE37 1185 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 REC114Q7Z4M0 266 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 ZSCAN29Q8IWY8 852 aaPredicted RBP5.07□□□□□ -1.6
NIPBL-206ENST00000509429 EFCAB13Q8IY85 973 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 PEX5LQ8IYB4 626 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 NUDT10Q8NFP7 164 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 OR8H1Q8NGG4 311 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 SUN5Q8TC36 379 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 BICD2Q8TD16 824 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 APPBP2Q92624 585 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 ARHGEF2Q92974 986 aaKnown RBP5.07□□□□□ -1.6
NIPBL-206ENST00000509429 NUDT11Q96G61 164 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 SCLT1Q96NL6 688 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 SRPK1Q96SB4 655 aaKnown RBP5.07□□□□□ -1.6
NIPBL-206ENST00000509429 FAM126AQ9BYI3 521 aaPredicted RBP5.07□□□□□ -1.6
NIPBL-206ENST00000509429 LRRCC1Q9C099 1032 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 KANSL2Q9H9L4 492 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 FANCFQ9NPI8 374 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 CTNNA3Q9UI47 895 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 LUC7L2Q9Y383 392 aaKnown RBP5.07□□□□□ -1.6
NIPBL-206ENST00000509429 C2CD2Q9Y426 696 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 IPPQ9Y573 584 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 MORC2Q9Y6X9 1032 aaPredicted RBP5.07□□□□□ -1.6
NIPBL-206ENST00000509429 CFAP43Q8NDM7 1665 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 MAP3K1Q13233 1512 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 RUSC2Q8N2Y8 1516 aa5.07□□□□□ -1.6
NIPBL-206ENST00000509429 TMEM94Q12767 1356 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 GPRASP1Q5JY77 1395 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 GOLGA6L10A0A0M3HER8 536 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 RASSF10A6NK89 507 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 K7ENM7 598 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 KCNQ2O43526 872 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 KPNA6O60684 536 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 NBNO60934 754 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 TMCC2O75069 709 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 FGFR1OPO95684 399 aaKnown RBP5.06□□□□□ -1.6
NIPBL-206ENST00000509429 BAG2O95816 211 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 GZMAP12544 262 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 USP8P40818 1118 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 MXI1P50539 228 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 RCAN1P53805 252 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 RIPK4P57078 832 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 NUCB2P80303 420 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 CCDC173Q0VFZ6 552 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 PAK2Q13177 524 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 TNIP1Q15025 636 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 SF3B3Q15393 1217 aaKnown RBP5.06□□□□□ -1.6
NIPBL-206ENST00000509429 TAF1CQ15572 869 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms