RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 FZD8Q9H461 694 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 NXF3Q9H4D5 531 aaKnown RBP7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 ZSCAN16Q9H4T2 348 aaPredicted RBP7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 PDZD7Q9H5P4 517 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 ARHGAP28Q9P2N2 729 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 PLAGL2Q9UPG8 496 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 PIN4Q9Y237 131 aaKnown RBP7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 SLC27A5Q9Y2P5 690 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 HES2Q9Y543 173 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 CNTNAP2Q9UHC6 1331 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 MYO7AQ13402 2215 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 MYMKA6NI61 221 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 SFI1A8K8P3 1242 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 TISP43B9A030 160 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 LCE2BO14633 110 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 RFX1P22670 979 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 IGFBP6P24592 240 aaPredicted RBP7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 TMOD1P28289 359 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 CASP1P29466 404 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 PHKA2P46019 1235 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 NPTX2P47972 431 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 ZNF131P52739 623 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 PRR20EP86478 221 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 PRR20CP86479 221 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 PRR20DP86480 221 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 PRR20BP86481 221 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 PRR20AP86496 221 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 SLC39A4Q6P5W5 647 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 LIAT1Q6ZQX7 453 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 OTUD6AQ7L8S5 288 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 CATSPER4Q7RTX7 472 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 SRGAP1Q7Z6B7 1085 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 TMEM192Q8IY95 271 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 CMTR2Q8IYT2 770 aaKnown RBP7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 CEP120Q8N960 986 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 GLIS3Q8NEA6 775 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 GSTCDQ8NEC7 633 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 MCPH1Q8NEM0 835 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 FEZF2Q8TBJ5 459 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 LEO1Q8WVC0 666 aaPredicted RBP7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 TCP11Q8WWU5 503 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 TNPO1Q92973 898 aaKnown RBP7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 DNAJC19Q96DA6 116 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 AK8Q96MA6 479 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 SCLT1Q96NL6 688 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 FTHL17Q9BXU8 183 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 GCOM2Q9BZD3 368 aaPredicted RBP7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 GOLPH3LQ9H4A5 285 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 FAM105AQ9NUU6 356 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 TMEM161AQ9NX61 479 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 CACNG4Q9UBN1 327 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 PCDHA7Q9UN72 937 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 PDCD11Q14690 1871 aaKnown RBP7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 MYH11P35749 1972 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 ZMYM2Q9UBW7 1377 aa7.97□□□□□ -1.13
TOPBP1-207ENST00000509162 A0A0U1RQF3 1178 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 LRRIQ4A6NIV6 560 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 GPR182O15218 404 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 SPTLC2O15270 562 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 GRM6O15303 877 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 SLC16A4O15374 487 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 FAM189A1O60320 539 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 PPP6R2O75170 966 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 BMP15O95972 392 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 PRKCBP05771 671 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 SFPQP23246 707 aaKnown RBP eCLIP7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 IRS1P35568 1242 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 NAMPTP43490 491 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 CASP5P51878 434 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 NCKAP1LP55160 1127 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 PEX3P56589 373 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 GIT2Q14161 759 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 STK38Q15208 465 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 NAB2Q15742 525 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 FAM187BQ17R55 369 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 EPC2Q52LR7 807 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 ZBTB41Q5SVQ8 909 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 BRICD5Q6PL45 260 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 TRIM67Q6ZTA4 783 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 SLC24A5Q71RS6 500 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 MRPL10Q7Z7H8 261 aaKnown RBP7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 GPBP1Q86WP2 473 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 GRAMD1CQ8IYS0 662 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 TMEM161BQ8NDZ6 487 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 HELQQ8TDG4 1101 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 STAMQ92783 540 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 ZFP42Q96MM3 310 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 YME1L1Q96TA2 773 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 JPH2Q9BR39 696 aaPredicted RBP7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 CDT1Q9H211 546 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 ELAC1Q9H777 363 aaKnown RBP7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 SLC28A3Q9HAS3 691 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 PTPRHQ9HD43 1115 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 C1orf112Q9NSG2 853 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 MARCH5Q9NX47 278 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 MIOSQ9NXC5 875 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 MSRAQ9UJ68 235 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 STXBP5LQ9Y2K9 1186 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 IPPQ9Y573 584 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 MTCH2Q9Y6C9 303 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms