RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 C4orf32Q8N8J7 132 aa10.7□□□□□ -0.7
PDGFRA-207ENST00000509092 CERKQ8TCT0 537 aa10.7□□□□□ -0.7
PDGFRA-207ENST00000509092 LSM14BQ9BX40 385 aaKnown RBP10.7□□□□□ -0.7
PDGFRA-207ENST00000509092 EIF2AQ9BY44 585 aaKnown RBP10.7□□□□□ -0.7
PDGFRA-207ENST00000509092 USP29Q9HBJ7 922 aa10.7□□□□□ -0.7
PDGFRA-207ENST00000509092 TNS3Q68CZ2 1445 aa10.7□□□□□ -0.7
PDGFRA-207ENST00000509092 RNMTO43148 476 aaKnown RBP10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 SERPINB7O75635 380 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 TTLL1O95922 423 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 ANPEPP15144 967 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 PTGIRP43119 386 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 ARFIP2P53365 341 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 NPEPPSP55786 919 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 SCARF1Q14162 830 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 LRRC24Q50LG9 513 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 Q6ZNX1 250 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 RGS9BPQ6ZS82 235 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 C3orf67Q6ZVT6 689 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 PASD1Q8IV76 773 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 PIP4K2CQ8TBX8 421 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 MCUR1Q96AQ8 359 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 C7orf25Q9BPX7 421 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 TRIM9Q9C026 710 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 CCSER1Q9C0I3 900 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 BHMT2Q9H2M3 363 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 ERVK-5Q9HDB9 667 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 ZDHHC7Q9NXF8 308 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 KIAA1522Q9P206 1035 aaPredicted RBP10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 DNAJB4Q9UDY4 337 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 E9PBE3 544 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 PODXLO00592 558 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 ZNF862O60290 1169 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 ASIC1P78348 528 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 ARID5AQ03989 594 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 C1orf228Q6PIY5 440 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 MPRIPQ6WCQ1 1025 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 COPS6Q7L5N1 327 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 CLNKQ7Z7G1 428 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 TREML1Q86YW5 311 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 BBS5Q8N3I7 341 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 KIAA0895Q8NCT3 520 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 C7orf43Q8WVR3 580 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 PRICKLE1Q96MT3 831 aaPredicted RBP10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 TANGO6Q9C0B7 1094 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 TAOK3Q9H2K8 898 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 EMILIN3Q9NT22 766 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 SAP30BPQ9UHR5 308 aaKnown RBP10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 AMFRQ9UKV5 643 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 TDRKHQ9Y2W6 561 aaKnown RBP10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 ACTL7BQ9Y614 415 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 RTL9Q8NET4 1388 aa10.69□□□□□ -0.7
PDGFRA-207ENST00000509092 UBAP1LF5GYI3 381 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 F8W8V4 182 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 C2CD2LO14523 706 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 GYG2O15488 501 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 EDF1O60869 148 aaKnown RBP10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 CBFA2T3O75081 653 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 MUTP22033 750 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 DNAJC3Q13217 504 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 ITGA7Q13683 1181 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 THOC5Q13769 683 aaKnown RBP10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 ZNF362Q5T0B9 420 aaPredicted RBP10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 ZNF530Q6P9A1 599 aaPredicted RBP10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 KLHDC10Q6PID8 442 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 RBM44Q6ZP01 1051 aaKnown RBP10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 PIK3AP1Q6ZUJ8 805 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 PATL1Q86TB9 770 aaKnown RBP10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 TRIM50Q86XT4 487 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 CROCCP3Q8IVE0 287 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 VPS52Q8N1B4 723 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 SDR16C5Q8N3Y7 309 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 SRBD1Q8N5C6 995 aaKnown RBP10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 CEP70Q8NHQ1 597 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 ART4Q93070 314 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 HSPBAP1Q96EW2 488 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 PTCD3Q96EY7 689 aaKnown RBP10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 LBHD1Q9BQE6 289 aaPredicted RBP10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 SPZ1Q9BXG8 430 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 EBF3Q9H4W6 596 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 NDE1Q9NXR1 346 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 HESX1Q9UBX0 185 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 LGALS13Q9UHV8 139 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 PPP1R9AQ9ULJ8 1098 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 RTCBQ9Y3I0 505 aaKnown RBP10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 FADS3Q9Y5Q0 445 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 TACC3Q9Y6A5 838 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 LTN1O94822 1766 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 PHF2O75151 1096 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 KRT38O76015 456 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 PDGFRBP09619 1106 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 ADORA1P30542 326 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 UBA7P41226 1012 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 LRRC63Q05C16 580 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 FUT2Q10981 343 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 TBL3Q12788 808 aaKnown RBP10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 MED21Q13503 144 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 MYBPC2Q14324 1141 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 HSP90AA5PQ58FG0 334 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 SLC2A7Q6PXP3 512 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 LRRC55Q6ZSA7 311 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms