RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 HAPLN2Q9GZV7 340 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 LMAN2LQ9H0V9 348 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 IKZF4Q9H2S9 585 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 DACT1Q9NYF0 836 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 RCOR1Q9UKL0 485 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 PCDHA7Q9UN72 937 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 STK24Q9Y6E0 443 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 ARL5CA6NH57 179 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 ERLIN2O94905 339 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 EFEMP2O95967 443 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 UBA7P41226 1012 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 NPTX2P47972 431 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 ME1P48163 572 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 PEX3P56589 373 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 DSC1Q08554 894 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 NAB2Q15742 525 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 NAALADL2Q58DX5 795 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 PTCRAQ6ISU1 281 aaPredicted RBP9.56□□□□□ -0.88
SNCA-211ENST00000508895 PPP4R3CPQ6ZMV5 832 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 COLGALT2Q8IYK4 626 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 ABI1Q8IZP0 508 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 MCPH1Q8NEM0 835 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 IGSF21Q96ID5 467 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 ZBTB45Q96K62 511 aaPredicted RBP9.56□□□□□ -0.88
SNCA-211ENST00000508895 B3GALT6Q96L58 329 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 SPATA32Q96LK8 384 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 CCDC43Q96MW1 224 aaKnown RBP9.56□□□□□ -0.88
SNCA-211ENST00000508895 APOL5Q9BWW9 433 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 NT5C3AQ9H0P0 336 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 RSAD1Q9HA92 442 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 TLR9Q9NR96 1032 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 SPG21Q9NZD8 308 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 CHMP5Q9NZZ3 219 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 PCDHB12Q9Y5F1 795 aa9.56□□□□□ -0.88
SNCA-211ENST00000508895 MTCL1Q9Y4B5 1905 aaKnown RBP9.55□□□□□ -0.88
SNCA-211ENST00000508895 C2orf71A6NGG8 1288 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 PTGESO14684 152 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 NRP1O14786 923 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 INPPL1O15357 1258 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 SLC16A4O15374 487 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 HOXA2O43364 376 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 MBTPS2O43462 519 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 PRKCBP05771 671 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 ITGA4P13612 1032 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 NAMPTP43490 491 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 RAB27AP51159 221 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 TFDP1Q14186 410 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 MCM6Q14566 821 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 E2F4Q16254 413 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 DUSP6Q16828 381 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 FAM187BQ17R55 369 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 RESP18Q5W5W9 173 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 LLGL2Q6P1M3 1020 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 SYCE2Q6PIF2 218 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 GLB1LQ6UWU2 654 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 CD300LGQ6UXG3 332 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 FAM178BQ8IXR5 827 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 EXOC8Q8IYI6 725 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 EFHBQ8N7U6 833 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 SYT2Q8N9I0 419 aaPredicted RBP9.55□□□□□ -0.88
SNCA-211ENST00000508895 RAD54LQ92698 747 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 CALML4Q96GE6 196 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 CDK5RAP3Q96JB5 506 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 FIZ1Q96SL8 496 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 TCF25Q9BQ70 676 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 SCAND2PQ9GZW5 306 aaPredicted RBP9.55□□□□□ -0.88
SNCA-211ENST00000508895 ZBP1Q9H171 429 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 EPHX3Q9H6B9 360 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 SNTG2Q9NY99 539 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 ARHGAP28Q9P2N2 729 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 DNM3Q9UQ16 869 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 HCN4Q9Y3Q4 1203 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 CNTNAP2Q9UHC6 1331 aa9.55□□□□□ -0.88
SNCA-211ENST00000508895 TECTAO75443 2155 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 ACKR2O00590 384 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 LILRB3O75022 631 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 CLASP2O75122 1294 aaKnown RBP9.54□□□□□ -0.88
SNCA-211ENST00000508895 SSBP05455 408 aaKnown RBP eCLIP9.54□□□□□ -0.88
SNCA-211ENST00000508895 WEE2P0C1S8 567 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 PLA2G4BP0C869 781 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 MYBP10242 640 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 AXLP30530 894 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 TXLNAP40222 546 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 DHX8Q14562 1220 aaKnown RBP9.54□□□□□ -0.88
SNCA-211ENST00000508895 SEZ6Q53EL9 994 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 NOTUMQ6P988 496 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 SLC27A1Q6PCB7 646 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 RNF168Q8IYW5 571 aaPredicted RBP9.54□□□□□ -0.88
SNCA-211ENST00000508895 VPS52Q8N1B4 723 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 KCTD17Q8N5Z5 321 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 PDILTQ8N807 584 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 C12orf76Q8N812 135 aaPredicted RBP9.54□□□□□ -0.88
SNCA-211ENST00000508895 RASSF8Q8NHQ8 419 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 MICAL1Q8TDZ2 1067 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 LARP4BQ92615 738 aaKnown RBP9.54□□□□□ -0.88
SNCA-211ENST00000508895 TARS2Q9BW92 718 aaKnown RBP9.54□□□□□ -0.88
SNCA-211ENST00000508895 C1QTNF1Q9BXJ1 281 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 CDT1Q9H211 546 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 S1PR5Q9H228 398 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 TLE6Q9H808 572 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms