RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 IQANK1A0A1B0GTG1 560 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 CSTBP04080 98 aaKnown RBP4.21□□□□□ -1.74
NEDD4-209ENST00000508871 CELA3AP09093 270 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 SRGAP2BP0DMP2 458 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 TNFSF4P23510 183 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 HOXD12P35452 270 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 AFMP43652 599 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 SLC12A2P55011 1212 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 DHX9Q08211 1270 aaKnown RBP4.21□□□□□ -1.74
NEDD4-209ENST00000508871 IFFO1Q0D2I5 559 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 PCBP2Q15366 365 aaKnown RBP eCLIP4.21□□□□□ -1.74
NEDD4-209ENST00000508871 OCLNQ16625 522 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 FAM69AQ5T7M9 428 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 CDCA2Q69YH5 1023 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-209ENST00000508871 THAP5Q7Z6K1 395 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 IQCF2Q8IXL9 164 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 COLGALT2Q8IYK4 626 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 FAM156AQ8NDB6 213 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 GRAMD1AQ96CP6 724 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 RRP36Q96EU6 259 aaKnown RBP4.21□□□□□ -1.74
NEDD4-209ENST00000508871 EAF1Q96JC9 268 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-209ENST00000508871 PRPF18Q99633 342 aaKnown RBP4.21□□□□□ -1.74
NEDD4-209ENST00000508871 TMUB1Q9BVT8 246 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 KLHL25Q9H0H3 589 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 COPS7BQ9H9Q2 264 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-209ENST00000508871 LIN7BQ9HAP6 207 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 ABHD14A-ACY1A0A1B0GW23 586 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 CAPN8A6NHC0 703 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 PODXLO00592 558 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 ENC1O14682 589 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 PLD2O14939 933 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 XYLBO75191 536 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 TBX18O95935 607 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 COL6A1P12109 1028 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 GUCY2CP25092 1073 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 WDR44Q5JSH3 913 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 ERICH5Q6P6B1 374 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 ANKRD13BQ86YJ7 626 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 SCUBE1Q8IWY4 988 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 SRRM1Q8IYB3 904 aaKnown RBP4.21□□□□□ -1.74
NEDD4-209ENST00000508871 FBXO27Q8NI29 283 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 KRT35Q92764 455 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 OPTNQ96CV9 577 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 STAMBPL1Q96FJ0 436 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 COG8Q96MW5 612 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 DCBLD2Q96PD2 775 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 FAM129AQ9BZQ8 928 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 OSBPL5Q9H0X9 879 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-209ENST00000508871 STMN4Q9H169 189 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-209ENST00000508871 LRRC37AA6NMS7 1700 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 DNAJC25-GNG10A0A024R161 153 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 NEMP1O14524 444 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 SUSD5O60279 629 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 SCGB2A1O75556 95 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 C7P10643 843 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 GJA1P17302 382 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 CETN1Q12798 172 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 LAMC2Q13753 1193 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 ZNF267Q14586 743 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-209ENST00000508871 KCNB1Q14721 858 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 BEND3Q5T5X7 828 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 RNF220Q5VTB9 566 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 ANO5Q75V66 913 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 SAMD7Q7Z3H4 446 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 UHMK1Q8TAS1 419 aaKnown RBP4.21□□□□□ -1.74
NEDD4-209ENST00000508871 C17orf50Q8WW18 174 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 GJA10Q969M2 543 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 PMEPA1Q969W9 287 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 CHCHD6Q9BRQ6 235 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 NUP62CLQ9H1M0 184 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 KAT14Q9H8E8 782 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 FBRSL1Q9HCM7 1045 aaKnown RBP4.21□□□□□ -1.74
NEDD4-209ENST00000508871 ANKEF1Q9NU02 776 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 SLC8A2Q9UPR5 921 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 SPATA31A1Q5TZJ5 1347 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 ITIH6Q6UXX5 1313 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 ABCC12Q96J65 1359 aa4.21□□□□□ -1.74
NEDD4-209ENST00000508871 GPR89AB7ZAQ6 455 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 INO80B-WBP1J3KQ70 363 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ATP2A1O14983 1001 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 BUB1O43683 1085 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 RNGTTO60942 597 aaKnown RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 CD4P01730 458 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 SBK2P0C263 348 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 GPR89BP0CG08 455 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 FSHRP23945 695 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 CTNNB1P35222 781 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 EIF2DP41214 584 aaKnown RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 MXI1P50539 228 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 COPAP53621 1224 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ADKP55263 362 aaKnown RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 HSD17B7P56937 341 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 RELBQ01201 579 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 GRB10Q13322 594 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 PPP2R5BQ15173 497 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ZMYND11Q15326 602 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 CTC1Q2NKJ3 1217 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ANKRD20A4Q4UJ75 823 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ANKRD20A8PQ5CZ79 823 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ANKRD20A2Q5SQ80 823 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms