RNA–Protein interactions for RNA: ENST00000508268.1

TMA16-204, Transcript of translation machinery associated 16 homolog, humanhuman

TSL 2 BASIC

Gene TMA16, Length 608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMA16-204ENST00000508268 KSR1Q8IVT5 923 aa13.5□□□□□ -0.25
TMA16-204ENST00000508268 ITFG1Q8TB96 612 aa13.5□□□□□ -0.25
TMA16-204ENST00000508268 COLEC11Q9BWP8 271 aa13.5□□□□□ -0.25
TMA16-204ENST00000508268 CHRDQ9H2X0 955 aa13.5□□□□□ -0.25
TMA16-204ENST00000508268 FBXW11Q9UKB1 542 aa13.5□□□□□ -0.25
TMA16-204ENST00000508268 GREB1Q4ZG55 1949 aa13.5□□□□□ -0.25
TMA16-204ENST00000508268 ARL5CA6NH57 179 aa13.49□□□□□ -0.25
TMA16-204ENST00000508268 CCL16O15467 120 aa13.49□□□□□ -0.25
TMA16-204ENST00000508268 C8AP07357 584 aa13.49□□□□□ -0.25
TMA16-204ENST00000508268 ITGA4P13612 1032 aa13.49□□□□□ -0.25
TMA16-204ENST00000508268 SFNP31947 248 aa13.49□□□□□ -0.25
TMA16-204ENST00000508268 MLH1P40692 756 aa13.49□□□□□ -0.25
TMA16-204ENST00000508268 LIFRP42702 1097 aa13.49□□□□□ -0.25
TMA16-204ENST00000508268 JAK3P52333 1124 aa13.49□□□□□ -0.25
TMA16-204ENST00000508268 FZD5Q13467 585 aa13.49□□□□□ -0.25
TMA16-204ENST00000508268 FUT10Q6P4F1 479 aa13.49□□□□□ -0.25
TMA16-204ENST00000508268 SYNE3Q6ZMZ3 975 aa13.49□□□□□ -0.25
TMA16-204ENST00000508268 GPR65Q8IYL9 337 aa13.49□□□□□ -0.25
TMA16-204ENST00000508268 CNNM3Q8NE01 707 aa13.49□□□□□ -0.25
TMA16-204ENST00000508268 CRYGNQ8WXF5 182 aa13.49□□□□□ -0.25
TMA16-204ENST00000508268 MBOAT7Q96N66 472 aa13.49□□□□□ -0.25
TMA16-204ENST00000508268 BARHL2Q9NY43 387 aa13.49□□□□□ -0.25
TMA16-204ENST00000508268 ZMIZ1Q9ULJ6 1067 aa13.49□□□□□ -0.25
TMA16-204ENST00000508268 MAN2B1O00754 1011 aa13.48□□□□□ -0.25
TMA16-204ENST00000508268 GAS7O60861 476 aa13.48□□□□□ -0.25
TMA16-204ENST00000508268 ECI2O75521 394 aa13.48□□□□□ -0.25
TMA16-204ENST00000508268 NCLP19338 710 aaKnown RBP13.48□□□□□ -0.25
TMA16-204ENST00000508268 SCNN1GP51170 649 aa13.48□□□□□ -0.25
TMA16-204ENST00000508268 DSC1Q08554 894 aa13.48□□□□□ -0.25
TMA16-204ENST00000508268 XKR3Q5GH77 459 aa13.48□□□□□ -0.25
TMA16-204ENST00000508268 UNQ6494/PRO21346Q6UXR6 183 aa13.48□□□□□ -0.25
TMA16-204ENST00000508268 MAMSTRQ6ZN01 415 aa13.48□□□□□ -0.25
TMA16-204ENST00000508268 NPAS3Q8IXF0 933 aa13.48□□□□□ -0.25
TMA16-204ENST00000508268 SMC5Q8IY18 1101 aa13.48□□□□□ -0.25
TMA16-204ENST00000508268 C12orf50Q8NA57 414 aaPredicted RBP13.48□□□□□ -0.25
TMA16-204ENST00000508268 DNASE1L2Q92874 299 aa13.48□□□□□ -0.25
TMA16-204ENST00000508268 GAD1Q99259 594 aa13.48□□□□□ -0.25
TMA16-204ENST00000508268 JPH2Q9BR39 696 aaPredicted RBP13.48□□□□□ -0.25
TMA16-204ENST00000508268 SH2D3AQ9BRG2 576 aa13.48□□□□□ -0.25
TMA16-204ENST00000508268 NIFKQ9BYG3 293 aaKnown RBP13.48□□□□□ -0.25
TMA16-204ENST00000508268 GPR62Q9BZJ7 368 aa13.48□□□□□ -0.25
TMA16-204ENST00000508268 RBM28Q9NW13 759 aaKnown RBP13.48□□□□□ -0.25
TMA16-204ENST00000508268 ADAM28Q9UKQ2 775 aa13.48□□□□□ -0.25
TMA16-204ENST00000508268 V9GY48 417 aaPredicted RBP13.48□□□□□ -0.25
TMA16-204ENST00000508268 LAMA1P25391 3075 aa13.48□□□□□ -0.25
TMA16-204ENST00000508268 DSPP15924 2871 aaKnown RBP13.47□□□□□ -0.25
TMA16-204ENST00000508268 SDK1Q7Z5N4 2213 aa13.47□□□□□ -0.25
TMA16-204ENST00000508268 IGKV6-21A0A0C4DH24 114 aa13.47□□□□□ -0.25
TMA16-204ENST00000508268 TMEM150BA6NC51 233 aa13.47□□□□□ -0.25
TMA16-204ENST00000508268 HOXA9P31269 272 aa13.47□□□□□ -0.25
TMA16-204ENST00000508268 CNR2P34972 360 aa13.47□□□□□ -0.25
TMA16-204ENST00000508268 LIMK1P53667 647 aa13.47□□□□□ -0.25
TMA16-204ENST00000508268 NUCB1Q02818 461 aa13.47□□□□□ -0.25
TMA16-204ENST00000508268 PABPC1LQ4VXU2 614 aaKnown RBP13.47□□□□□ -0.25
TMA16-204ENST00000508268 UBXN11Q5T124 520 aa13.47□□□□□ -0.25
TMA16-204ENST00000508268 PRSS55Q6UWB4 352 aaPredicted RBP13.47□□□□□ -0.25
TMA16-204ENST00000508268 REXO1Q8N1G1 1221 aaKnown RBP13.47□□□□□ -0.25
TMA16-204ENST00000508268 ING5Q8WYH8 240 aa13.47□□□□□ -0.25
TMA16-204ENST00000508268 IFT122Q9HBG6 1241 aa13.47□□□□□ -0.25
TMA16-204ENST00000508268 KCNH3Q9ULD8 1083 aa13.47□□□□□ -0.25
TMA16-204ENST00000508268 IPPQ9Y573 584 aa13.47□□□□□ -0.25
TMA16-204ENST00000508268 COL4A3BPQ9Y5P4 624 aa13.47□□□□□ -0.25
TMA16-204ENST00000508268 NOTCH4Q99466 2003 aa13.47□□□□□ -0.25
TMA16-204ENST00000508268 SPAG17Q6Q759 2223 aa13.47□□□□□ -0.25
TMA16-204ENST00000508268 GCN1Q92616 2671 aaKnown RBP13.47□□□□□ -0.25
TMA16-204ENST00000508268 SF3B1O75533 1304 aaKnown RBP eCLIP13.46□□□□□ -0.259e-6■■■■■ 68.9
TMA16-204ENST00000508268 NBEAQ8NFP9 2946 aa13.46□□□□□ -0.25
TMA16-204ENST00000508268 C1QTNF9BB2RNN3 333 aa13.46□□□□□ -0.25
TMA16-204ENST00000508268 MAFO75444 373 aaPredicted RBP13.46□□□□□ -0.25
TMA16-204ENST00000508268 TADA2AO75478 443 aa13.46□□□□□ -0.25
TMA16-204ENST00000508268 C1QTNF9P0C862 333 aa13.46□□□□□ -0.25
TMA16-204ENST00000508268 CXCL12P48061 93 aa13.46□□□□□ -0.25
TMA16-204ENST00000508268 LRCH2Q5VUJ6 765 aa13.46□□□□□ -0.25
TMA16-204ENST00000508268 CEP68Q76N32 757 aa13.46□□□□□ -0.25
TMA16-204ENST00000508268 SMG8Q8ND04 991 aaKnown RBP13.46□□□□□ -0.25
TMA16-204ENST00000508268 SLC7A14Q8TBB6 771 aa13.46□□□□□ -0.25
TMA16-204ENST00000508268 COL26A1Q96A83 441 aa13.46□□□□□ -0.25
TMA16-204ENST00000508268 ZFP42Q96MM3 310 aa13.46□□□□□ -0.25
TMA16-204ENST00000508268 TEKT3Q9BXF9 490 aa13.46□□□□□ -0.25
TMA16-204ENST00000508268 LRRC2Q9BYS8 371 aa13.46□□□□□ -0.25
TMA16-204ENST00000508268 UNC45AQ9H3U1 944 aa13.46□□□□□ -0.25
TMA16-204ENST00000508268 RWDD1Q9H446 243 aaPredicted RBP13.46□□□□□ -0.25
TMA16-204ENST00000508268 LMAN1LQ9HAT1 526 aa13.46□□□□□ -0.25
TMA16-204ENST00000508268 HCFC1R1Q9NWW0 138 aa13.46□□□□□ -0.25
TMA16-204ENST00000508268 MRPS23Q9Y3D9 190 aaKnown RBP13.46□□□□□ -0.25
TMA16-204ENST00000508268 TICRRQ7Z2Z1 1910 aa13.46□□□□□ -0.25
TMA16-204ENST00000508268 SOBPA7XYQ1 873 aa13.45□□□□□ -0.26
TMA16-204ENST00000508268 DDX11L8A8MPP1 907 aa13.45□□□□□ -0.26
TMA16-204ENST00000508268 CHURC1-FNTBB4DL54 471 aa13.45□□□□□ -0.26
TMA16-204ENST00000508268 MSH4O15457 936 aa13.45□□□□□ -0.26
TMA16-204ENST00000508268 HRO43593 1189 aa13.45□□□□□ -0.26
TMA16-204ENST00000508268 ERLIN2O94905 339 aa13.45□□□□□ -0.26
TMA16-204ENST00000508268 SRGAP2CP0DJJ0 459 aa13.45□□□□□ -0.26
TMA16-204ENST00000508268 HOXA11P31270 313 aaPredicted RBP13.45□□□□□ -0.26
TMA16-204ENST00000508268 FNTBP49356 437 aa13.45□□□□□ -0.26
TMA16-204ENST00000508268 SATB1Q01826 763 aa13.45□□□□□ -0.26
TMA16-204ENST00000508268 SRSF5Q13243 272 aaKnown RBP13.45□□□□□ -0.26
TMA16-204ENST00000508268 RTN1Q16799 776 aa13.45□□□□□ -0.26
TMA16-204ENST00000508268 RTP2Q5QGT7 225 aa13.45□□□□□ -0.26
TMA16-204ENST00000508268 MIER3Q7Z3K6 550 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms