RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 CTXN3Q4LDR2 81 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 UBXN11Q5T124 520 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 PRPF39Q86UA1 669 aaKnown RBP8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 MIER2Q8N344 545 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 FAM184AQ8NB25 1140 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 FBXO15Q8NCQ5 510 aaPredicted RBP8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 ANKRD20A12PQ8NF67 263 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 JADE3Q92613 823 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 RUBCNQ92622 972 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 CASP10Q92851 521 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 BRIP1Q9BX63 1249 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 LGR4Q9BXB1 951 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 PAIP1Q9H074 479 aaKnown RBP8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 AATFQ9NY61 560 aaKnown RBP eCLIP8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 ACTR3BQ9P1U1 418 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 POLR3KQ9Y2Y1 108 aaPredicted RBP8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 SNX13Q9Y5W8 968 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 THOC2Q8NI27 1593 aaKnown RBP8.15□□□□□ -1.11
PDGFRA-206ENST00000508170 FAM86C2PA6NEL3 165 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 AP3D1O14617 1153 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 EFCAB14O75071 495 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 GLRX3O76003 335 aaKnown RBP8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 LETM1O95202 739 aaPredicted RBP8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 TRIM16O95361 564 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 SRGAP2CP0DJJ0 459 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 C6P13671 934 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 ARF4P18085 180 aaPredicted RBP8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 ADSLP30566 484 aaPredicted RBP8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 LSSP48449 732 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 CPT1AP50416 773 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 ZNF543Q08ER8 600 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 LASP1Q14847 261 aaKnown RBP8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 MTFR1Q15390 333 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 DLGAP5Q15398 846 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 MPEG1Q2M385 716 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 GNPTABQ3T906 1256 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 MAP3K21Q5TCX8 1036 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 NAA16Q6N069 864 aaPredicted RBP8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 ABHD17CQ6PCB6 329 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 THAP5Q7Z6K1 395 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 MOGAT3Q86VF5 341 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 GALNT6Q8NCL4 622 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 BBOF1Q8ND07 529 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 GRK7Q8WTQ7 553 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 C18orf8Q96DM3 657 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 KCNC2Q96PR1 638 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 VEZTQ9HBM0 779 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 THG1LQ9NWX6 298 aaKnown RBP8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 TLR7Q9NYK1 1049 aaKnown RBP8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 USP20Q9Y2K6 914 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 CAPN8A6NHC0 703 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 GOLGA8AA7E2F4 631 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 GOLGA8BA8MQT2 603 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 LGALS16A8MUM7 142 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 RNF113AO15541 343 aaKnown RBP8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 MGEA5O60502 916 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 PIAS2O75928 621 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 CDKL5O76039 1030 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 SLITRK3O94933 977 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 FOXO1Q12778 655 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 MAP3K12Q12852 859 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 EFR3AQ14156 821 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 TUBGCP3Q96CW5 907 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 NACAP1Q9BZK3 213 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 B3GNT4Q9C0J1 378 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 ELP3Q9H9T3 547 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 CD93Q9NPY3 652 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 BMP2KQ9NSY1 1161 aaPredicted RBP8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 SPATA7Q9P0W8 599 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 SAMD15Q9P1V8 674 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 FAM153AQ9UHL3 310 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 NSD2O96028 1365 aa8.14□□□□□ -1.11
PDGFRA-206ENST00000508170 FHAD1B1AJZ9 1412 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 CLRN2A0PK11 232 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 POTEMA6NI47 508 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 MEIS3P2A8K0S8 358 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 ASAP2O43150 1006 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 LARGE1O95461 756 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 DNAJB1P25685 340 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 GDI1P31150 447 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 PEX5P50542 639 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 HIRAP54198 1017 aaPredicted RBP8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 CREMQ03060 361 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 ACY1Q03154 408 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 PTK2BQ14289 1009 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 SNX30Q5VWJ9 437 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 POTEGQ6S5H5 508 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 C15orf52Q6ZUT6 534 aaKnown RBP8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 CENPQQ7L2Z9 268 aaPredicted RBP8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 SUPT20HQ8NEM7 779 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 LINS1Q8NG48 757 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 ETNPPLQ8TBG4 499 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 FAM216AQ8WUB2 273 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 ZNF764Q96H86 408 aaPredicted RBP8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 EPSTI1Q96J88 318 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 NOX5Q96PH1 765 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 ATP6V0BQ99437 205 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 TCF25Q9BQ70 676 aa8.13□□□□□ -1.11
PDGFRA-206ENST00000508170 CARD11Q9BXL7 1154 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms