RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TAF11Q15544 211 aa19.02■□□□□ 0.63
NUP54-205ENST00000507257 PHLDB3Q6NSJ2 640 aa19.02■□□□□ 0.63
NUP54-205ENST00000507257 DPP8Q6V1X1 898 aaPredicted RBP19.02■□□□□ 0.63
NUP54-205ENST00000507257 ECHDC2Q86YB7 292 aa19.02■□□□□ 0.63
NUP54-205ENST00000507257 MGARPQ8TDB4 240 aa19.02■□□□□ 0.63
NUP54-205ENST00000507257 MAIP1Q8WWC4 291 aa19.02■□□□□ 0.63
NUP54-205ENST00000507257 UTP4Q969X6 686 aaKnown RBP19.02■□□□□ 0.63
NUP54-205ENST00000507257 SNF8Q96H20 258 aa19.02■□□□□ 0.63
NUP54-205ENST00000507257 PLVAPQ9BX97 442 aa19.02■□□□□ 0.63
NUP54-205ENST00000507257 CD209Q9NNX6 404 aa19.02■□□□□ 0.63
NUP54-205ENST00000507257 NKIRAS1Q9NYS0 192 aa19.02■□□□□ 0.63
NUP54-205ENST00000507257 MEIS2O14770 477 aa19.01■□□□□ 0.63
NUP54-205ENST00000507257 AHCYL1O43865 530 aa19.01■□□□□ 0.63
NUP54-205ENST00000507257 CDH16O75309 829 aa19.01■□□□□ 0.63
NUP54-205ENST00000507257 FAM13AO94988 1023 aa19.01■□□□□ 0.63
NUP54-205ENST00000507257 FOSP01100 380 aaPredicted RBP19.01■□□□□ 0.63
NUP54-205ENST00000507257 TAC1P20366 129 aa19.01■□□□□ 0.63
NUP54-205ENST00000507257 SREBF1P36956 1147 aa19.01■□□□□ 0.63
NUP54-205ENST00000507257 RWDD2BP57060 319 aa19.01■□□□□ 0.63
NUP54-205ENST00000507257 PTK6Q13882 451 aa19.01■□□□□ 0.63
NUP54-205ENST00000507257 MPP2Q14168 576 aa19.01■□□□□ 0.63
NUP54-205ENST00000507257 TUFT1Q9NNX1 390 aa19.01■□□□□ 0.63
NUP54-205ENST00000507257 SEPT11Q9NVA2 429 aaKnown RBP19.01■□□□□ 0.63
NUP54-205ENST00000507257 EURLQ9NYK6 297 aa19.01■□□□□ 0.63
NUP54-205ENST00000507257 SORBS3O60504 671 aa19■□□□□ 0.63
NUP54-205ENST00000507257 CYP1A2P05177 515 aa19■□□□□ 0.63
NUP54-205ENST00000507257 LINGO3P0C6S8 592 aa19■□□□□ 0.63
NUP54-205ENST00000507257 CREB1P16220 341 aa19■□□□□ 0.63
NUP54-205ENST00000507257 MUTP22033 750 aa19■□□□□ 0.63
NUP54-205ENST00000507257 RXRBP28702 533 aa19■□□□□ 0.63
NUP54-205ENST00000507257 POLGP54098 1239 aaPredicted RBP19■□□□□ 0.63
NUP54-205ENST00000507257 MRPS35P82673 323 aaKnown RBP19■□□□□ 0.63
NUP54-205ENST00000507257 BFSP1Q12934 665 aa19■□□□□ 0.63
NUP54-205ENST00000507257 QRICH1Q2TAL8 776 aa19■□□□□ 0.63
NUP54-205ENST00000507257 PRR16Q569H4 304 aa19■□□□□ 0.63
NUP54-205ENST00000507257 WASHC2DQ5SRD0 308 aa19■□□□□ 0.63
NUP54-205ENST00000507257 C1orf186Q6ZWK4 172 aa19■□□□□ 0.63
NUP54-205ENST00000507257 CCDC25Q86WR0 208 aa19■□□□□ 0.63
NUP54-205ENST00000507257 MARCH10Q8NA82 808 aaPredicted RBP19■□□□□ 0.63
NUP54-205ENST00000507257 FIZ1Q96SL8 496 aa19■□□□□ 0.63
NUP54-205ENST00000507257 PARVGQ9HBI0 331 aa19■□□□□ 0.63
NUP54-205ENST00000507257 ETNK1Q9HBU6 452 aa19■□□□□ 0.63
NUP54-205ENST00000507257 KCNK9Q9NPC2 374 aa19■□□□□ 0.63
NUP54-205ENST00000507257 AGPAT3Q9NRZ7 376 aa19■□□□□ 0.63
NUP54-205ENST00000507257 CYP39A1Q9NYL5 469 aa19■□□□□ 0.63
NUP54-205ENST00000507257 UVRAGQ9P2Y5 699 aa19■□□□□ 0.63
NUP54-205ENST00000507257 ZNF536O15090 1300 aa19■□□□□ 0.63
NUP54-205ENST00000507257 TCRBV7S2A1N4TA0A589 114 aa19■□□□□ 0.63
NUP54-205ENST00000507257 ANKRD33BA6NCL7 494 aa19■□□□□ 0.63
NUP54-205ENST00000507257 TRAFD1O14545 582 aaPredicted RBP19■□□□□ 0.63
NUP54-205ENST00000507257 ACSL3O95573 720 aa19■□□□□ 0.63
NUP54-205ENST00000507257 IVDP26440 423 aa19■□□□□ 0.63
NUP54-205ENST00000507257 NR1H3Q13133 447 aa19■□□□□ 0.63
NUP54-205ENST00000507257 LBRQ14739 615 aaKnown RBP19■□□□□ 0.63
NUP54-205ENST00000507257 STAT4Q14765 748 aa19■□□□□ 0.63
NUP54-205ENST00000507257 SETDB1Q15047 1291 aa19■□□□□ 0.63
NUP54-205ENST00000507257 SGSM1Q2NKQ1 1148 aa19■□□□□ 0.63
NUP54-205ENST00000507257 RNF207Q6ZRF8 634 aa19■□□□□ 0.63
NUP54-205ENST00000507257 OTUD6AQ7L8S5 288 aa19■□□□□ 0.63
NUP54-205ENST00000507257 ANKRD42Q8N9B4 389 aa19■□□□□ 0.63
NUP54-205ENST00000507257 STK32AQ8WU08 396 aa19■□□□□ 0.63
NUP54-205ENST00000507257 CRAMP1Q96RY5 1269 aa19■□□□□ 0.63
NUP54-205ENST00000507257 EIF2AK1Q9BQI3 630 aaKnown RBP19■□□□□ 0.63
NUP54-205ENST00000507257 KIF9Q9HAQ2 790 aa19■□□□□ 0.63
NUP54-205ENST00000507257 UBN1Q9NPG3 1134 aa19■□□□□ 0.63
NUP54-205ENST00000507257 KCND2Q9NZV8 630 aa19■□□□□ 0.63
NUP54-205ENST00000507257 PCDHA1Q9Y5I3 950 aa19■□□□□ 0.63
NUP54-205ENST00000507257 USH1CQ9Y6N9 552 aa19■□□□□ 0.63
NUP54-205ENST00000507257 UBAP1LF5GYI3 381 aa18.99■□□□□ 0.63
NUP54-205ENST00000507257 PEX11AO75192 247 aa18.99■□□□□ 0.63
NUP54-205ENST00000507257 SARNPP82979 210 aaKnown RBP18.99■□□□□ 0.63
NUP54-205ENST00000507257 IL9RQ01113 521 aa18.99■□□□□ 0.63
NUP54-205ENST00000507257 KRT17Q04695 432 aa18.99■□□□□ 0.63
NUP54-205ENST00000507257 MESDQ14696 234 aa18.99■□□□□ 0.63
NUP54-205ENST00000507257 ARHGAP44Q17R89 818 aa18.99■□□□□ 0.63
NUP54-205ENST00000507257 RC3H1Q5TC82 1133 aaKnown RBP18.99■□□□□ 0.63
NUP54-205ENST00000507257 CEP128Q6ZU80 1094 aa18.99■□□□□ 0.63
NUP54-205ENST00000507257 INTS8Q75QN2 995 aaKnown RBP18.99■□□□□ 0.63
NUP54-205ENST00000507257 ZNF720Q7Z2F6 126 aa18.99■□□□□ 0.63
NUP54-205ENST00000507257 ANKRD35Q8N283 1001 aa18.99■□□□□ 0.63
NUP54-205ENST00000507257 PIGOQ8TEQ8 1089 aa18.99■□□□□ 0.63
NUP54-205ENST00000507257 GRK7Q8WTQ7 553 aa18.99■□□□□ 0.63
NUP54-205ENST00000507257 SLC20A1Q8WUM9 679 aa18.99■□□□□ 0.63
NUP54-205ENST00000507257 TRAIPQ9BWF2 469 aa18.99■□□□□ 0.63
NUP54-205ENST00000507257 PTPN22Q9Y2R2 807 aa18.99■□□□□ 0.63
NUP54-205ENST00000507257 LOXHD1Q8IVV2 1947 aa18.99■□□□□ 0.63
NUP54-205ENST00000507257 PMM2O15305 246 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 ABHD2P08910 425 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 ATP6V1C1P21283 382 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 SLC16A2P36021 539 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 CETN1Q12798 172 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 LMNTD2Q8IXW0 634 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 PSPC1Q8WXF1 523 aaKnown RBP18.98■□□□□ 0.63
NUP54-205ENST00000507257 OSBPL1AQ9BXW6 950 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 PITPNM3Q9BZ71 974 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 FOXP3Q9BZS1 431 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 GTF3C4Q9UKN8 822 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 TRIM33Q9UPN9 1127 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 DCTN3O75935 186 aa18.98■□□□□ 0.63
NUP54-205ENST00000507257 NPTXRO95502 500 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms