RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 HCFC1R1Q9NWW0 138 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 PCDHGA5Q9Y5G8 931 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 PIAS3Q9Y6X2 628 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 COL1A2P08123 1366 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 ASCC3Q8N3C0 2202 aaKnown RBP8.18□□□□□ -1.1
VCAN-207ENST00000507162 CFAP46Q8IYW2 2715 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 GON4LQ3T8J9 2241 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 SPAARA0A1B0GVQ0 90 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 MAGEB2O15479 319 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 ATG7O95352 703 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 PAPLNO95428 1278 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 HNRNPA1P09651 372 aaKnown RBP eCLIP8.17□□□□□ -1.1
VCAN-207ENST00000507162 PLA2G2AP14555 144 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 ATP4AP20648 1035 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 GDI1P31150 447 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 KIF5BP33176 963 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 PTGDRQ13258 359 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 LRRC32Q14392 662 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 UBE2SQ16763 222 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 PABPC1LQ4VXU2 614 aaKnown RBP8.17□□□□□ -1.1
VCAN-207ENST00000507162 ABHD15Q6UXT9 468 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 Q6ZS52 159 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 DNASE1L2Q92874 299 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 IRF7Q92985 503 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 FAM227BQ96M60 508 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 MXRA8Q9BRK3 442 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 GCOM2Q9BZD3 368 aaPredicted RBP8.17□□□□□ -1.1
VCAN-207ENST00000507162 SLC32A1Q9H598 525 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 TMEM9BQ9NQ34 198 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 ZBTB40Q9NUA8 1239 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 MARCH5Q9NX47 278 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 KANSL3Q9P2N6 904 aa8.17□□□□□ -1.1
VCAN-207ENST00000507162 DNMT3BQ9UBC3 853 aaKnown RBP8.17□□□□□ -1.1
VCAN-207ENST00000507162 PIN4Q9Y237 131 aaKnown RBP8.17□□□□□ -1.1
VCAN-207ENST00000507162 IGKV6D-21A0A0A0MT36 114 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 F8W810 466 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 PIK3CDO00329 1044 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 CYTH3O43739 400 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 NFASCO94856 1347 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 CAPNS1P04632 268 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 C8AP07357 584 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 GPC3P51654 580 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 SIM1P81133 766 aaPredicted RBP8.16□□□□□ -1.1
VCAN-207ENST00000507162 ITGB3BPQ13352 177 aaPredicted RBP8.16□□□□□ -1.1
VCAN-207ENST00000507162 USP41Q3LFD5 358 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 MIS18BP1Q6P0N0 1132 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 PRSS55Q6UWB4 352 aaPredicted RBP8.16□□□□□ -1.1
VCAN-207ENST00000507162 AGMOQ6ZNB7 445 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 CCDC60Q8IWA6 550 aaPredicted RBP8.16□□□□□ -1.1
VCAN-207ENST00000507162 ELSPBP1Q96BH3 223 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 GPR62Q9BZJ7 368 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 CCDC86Q9H6F5 360 aaKnown RBP8.16□□□□□ -1.1
VCAN-207ENST00000507162 PSTPIP2Q9H939 334 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 RSAD1Q9HA92 442 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 ZFP14Q9HCL3 533 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 ZNF334Q9HCZ1 680 aaPredicted RBP8.16□□□□□ -1.1
VCAN-207ENST00000507162 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.16□□□□□ -1.1
VCAN-207ENST00000507162 FNIP2Q9P278 1114 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 KCNH3Q9ULD8 1083 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 PCDHA6Q9UN73 950 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 RAXQ9Y2V3 346 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 PCDHB2Q9Y5E7 798 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 PCDHA8Q9Y5H6 950 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 RAI2Q9Y5P3 530 aa8.16□□□□□ -1.1
VCAN-207ENST00000507162 A0A0D9SFI3 127 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 LNP1A1A4G5 178 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 SPDYE3A6NKU9 549 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 KHNYNO15037 678 aaKnown RBP8.15□□□□□ -1.1
VCAN-207ENST00000507162 ARHGAP6O43182 974 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 EXTL3O43909 919 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 ZNF623O75123 536 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 NR1I2O75469 434 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 PAPSS2O95340 614 aaPredicted RBP8.15□□□□□ -1.1
VCAN-207ENST00000507162 CCNE2O96020 404 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 C1RP00736 705 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 HOXA6P31267 233 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 RAB27AP51159 221 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 KPNA1P52294 538 aaPredicted RBP8.15□□□□□ -1.1
VCAN-207ENST00000507162 GRM4Q14833 912 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 PLK5Q496M5 336 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 ZNF589Q86UQ0 364 aaPredicted RBP8.15□□□□□ -1.1
VCAN-207ENST00000507162 COLGALT2Q8IYK4 626 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 ZNF710Q8N1W2 664 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 PI4K2BQ8TCG2 481 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 COLEC11Q9BWP8 271 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 AGO4Q9HCK5 861 aaKnown RBP8.15□□□□□ -1.1
VCAN-207ENST00000507162 CHST7Q9NS84 486 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 GDE1Q9NZC3 331 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 FBXW11Q9UKB1 542 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 CEP131Q9UPN4 1083 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 CELSR3Q9NYQ7 3312 aa8.15□□□□□ -1.1
VCAN-207ENST00000507162 TICRRQ7Z2Z1 1910 aa8.15□□□□□ -1.11
VCAN-207ENST00000507162 MTCL1Q9Y4B5 1905 aaKnown RBP8.15□□□□□ -1.11
VCAN-207ENST00000507162 TTC41PQ6P2S7 1318 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 A0A087WZ62 844 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 CDX4O14627 284 aaPredicted RBP8.14□□□□□ -1.11
VCAN-207ENST00000507162 ZNF263O14978 683 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 DCLK1O15075 740 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 RHOBTB1O94844 696 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 CEBPBP17676 345 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms