RNA–Protein interactions for RNA: ENST00000507017.5

SFXN1-206, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-206ENST00000507017 CAMK1Q14012 370 aa8.42□□□□□ -1.06
SFXN1-206ENST00000507017 HSP90AA2PQ14568 343 aaPredicted RBP8.42□□□□□ -1.06
SFXN1-206ENST00000507017 NBR1Q14596 966 aa8.42□□□□□ -1.06
SFXN1-206ENST00000507017 AMHR2Q16671 573 aa8.42□□□□□ -1.06
SFXN1-206ENST00000507017 ZNF568Q3ZCX4 644 aa8.42□□□□□ -1.06
SFXN1-206ENST00000507017 ATF7IP2Q5U623 682 aa8.42□□□□□ -1.06
SFXN1-206ENST00000507017 RINT1Q6NUQ1 792 aa8.42□□□□□ -1.06
SFXN1-206ENST00000507017 LRRC55Q6ZSA7 311 aa8.42□□□□□ -1.06
SFXN1-206ENST00000507017 RBM23Q86U06 439 aaKnown RBP8.42□□□□□ -1.06
SFXN1-206ENST00000507017 SYT2Q8N9I0 419 aaPredicted RBP8.42□□□□□ -1.06
SFXN1-206ENST00000507017 KRI1Q8N9T8 703 aaKnown RBP8.42□□□□□ -1.06
SFXN1-206ENST00000507017 SMG8Q8ND04 991 aaKnown RBP8.42□□□□□ -1.06
SFXN1-206ENST00000507017 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.42□□□□□ -1.06
SFXN1-206ENST00000507017 TSPAN18Q96SJ8 248 aa8.42□□□□□ -1.06
SFXN1-206ENST00000507017 GAD1Q99259 594 aa8.42□□□□□ -1.06
SFXN1-206ENST00000507017 PYM1Q9BRP8 204 aaKnown RBP8.42□□□□□ -1.06
SFXN1-206ENST00000507017 TCHPQ9BT92 498 aa8.42□□□□□ -1.06
SFXN1-206ENST00000507017 EIF2AQ9BY44 585 aaKnown RBP8.42□□□□□ -1.06
SFXN1-206ENST00000507017 PDZD7Q9H5P4 517 aa8.42□□□□□ -1.06
SFXN1-206ENST00000507017 SFXN1Q9H9B4 322 aa8.42□□□□□ -1.06
SFXN1-206ENST00000507017 GPRC5CQ9NQ84 441 aa8.42□□□□□ -1.06
SFXN1-206ENST00000507017 TNFSF13BQ9Y275 285 aa8.42□□□□□ -1.06
SFXN1-206ENST00000507017 PLXNA4Q9HCM2 1894 aa8.42□□□□□ -1.06
SFXN1-206ENST00000507017 NCOR1O75376 2440 aa8.42□□□□□ -1.06
SFXN1-206ENST00000507017 TTC28Q96AY4 2481 aa8.42□□□□□ -1.06
SFXN1-206ENST00000507017 ARHGEF37A1IGU5 675 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 C2orf71A6NGG8 1288 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 E9PMD0 336 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 NRP1O14786 923 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 B4GALT5O43286 388 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 STX6O43752 255 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 TBX10O75333 385 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 FAM13AO94988 1023 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 CD2BP2O95400 341 aaKnown RBP8.41□□□□□ -1.06
SFXN1-206ENST00000507017 POMCP01189 267 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 PLA2G4BP0C869 781 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 MCF2P10911 925 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 IL9P15248 144 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 SYT1P21579 422 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 PAX3P23760 479 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 KLRC2P26717 231 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 NPTX2P47972 431 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 SCNN1GP51170 649 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 ERVFC1P60507 584 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 ZP2Q05996 745 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 DSC1Q08554 894 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 SF3A1Q15459 793 aaKnown RBP8.41□□□□□ -1.06
SFXN1-206ENST00000507017 USP41Q3LFD5 358 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 LONRF3Q496Y0 759 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 TMEM119Q4V9L6 283 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 ATL3Q6DD88 541 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 ANKRD54Q6NXT1 300 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 MPZL3Q6UWV2 235 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 ZPBP2Q6X784 338 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 CCDC73Q6ZRK6 1079 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 STXBP4Q6ZWJ1 553 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 C1orf186Q6ZWK4 172 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 ADGRD2Q7Z7M1 963 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 COLGALT2Q8IYK4 626 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 HDAC7Q8WUI4 952 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 LARP4BQ92615 738 aaKnown RBP8.41□□□□□ -1.06
SFXN1-206ENST00000507017 BICD1Q96G01 975 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 DDX27Q96GQ7 796 aaKnown RBP8.41□□□□□ -1.06
SFXN1-206ENST00000507017 MSLNLQ96KJ4 702 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 NTPCRQ9BSD7 190 aaKnown RBP8.41□□□□□ -1.06
SFXN1-206ENST00000507017 PHF7Q9BWX1 381 aaPredicted RBP8.41□□□□□ -1.06
SFXN1-206ENST00000507017 CCSER1Q9C0I3 900 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 CCDC113Q9H0I3 377 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 NXF3Q9H4D5 531 aaKnown RBP8.41□□□□□ -1.06
SFXN1-206ENST00000507017 PARVGQ9HBI0 331 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 ARHGAP28Q9P2N2 729 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 ADAM28Q9UKQ2 775 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 BRWD1Q9NSI6 2320 aa8.41□□□□□ -1.06
SFXN1-206ENST00000507017 TDRD15B5MCY1 1934 aaKnown RBP8.41□□□□□ -1.06
SFXN1-206ENST00000507017 NT5C1B-RDH14C9J2C7 533 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 DCXO43602 365 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 TADA2AO75478 443 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 TOM1L1O75674 476 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 GLUD1P00367 558 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 GAP43P17677 238 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 LTBRP36941 435 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 PBX3P40426 434 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 GRM5P41594 1212 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 MATR3P43243 847 aaKnown RBP eCLIP8.4□□□□□ -1.06
SFXN1-206ENST00000507017 ALCAMQ13740 583 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 CBX2Q14781 532 aaPredicted RBP8.4□□□□□ -1.06
SFXN1-206ENST00000507017 NOLC1Q14978 699 aaKnown RBP eCLIP8.4□□□□□ -1.06
SFXN1-206ENST00000507017 PTPN14Q15678 1187 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 TMEM31Q5JXX7 168 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 ATAT1Q5SQI0 421 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 GPBP1Q86WP2 473 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 PLCD3Q8N3E9 789 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 STAMQ92783 540 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 KCNN1Q92952 543 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 HVCN1Q96D96 273 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 ACAP3Q96P50 834 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 CUEDC2Q9H467 287 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 PLEKHA4Q9H4M7 779 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 FNIP2Q9P278 1114 aa8.4□□□□□ -1.06
SFXN1-206ENST00000507017 SEL1LQ9UBV2 794 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms