RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 SCLYQ96I15 445 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 MBOAT7Q96N66 472 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 CTAGE1Q96RT6 745 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 NOC4LQ9BVI4 516 aaKnown RBP10.67□□□□□ -0.7
CLCN3-205ENST00000506924 TEKT3Q9BXF9 490 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 SMARCAD1Q9H4L7 1026 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 TRIM33Q9UPN9 1127 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 LTBP2Q14767 1821 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 EIF4EBP3O60516 100 aaPredicted RBP10.66□□□□□ -0.7
CLCN3-205ENST00000506924 PSMD10O75832 226 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 ACRP10323 421 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 CSF2RAP15509 400 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 ITPKAP23677 461 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 IRS1P35568 1242 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 EPHB4P54760 987 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 PTPN11Q06124 597 aaPredicted RBP10.66□□□□□ -0.7
CLCN3-205ENST00000506924 GRM2Q14416 872 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 PLCB4Q15147 1175 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 LARP1BQ659C4 914 aaKnown RBP10.66□□□□□ -0.7
CLCN3-205ENST00000506924 PPP4R3AQ6IN85 833 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 ZNF746Q6NUN9 644 aaPredicted RBP10.66□□□□□ -0.7
CLCN3-205ENST00000506924 MIS18BP1Q6P0N0 1132 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 MOXD1Q6UVY6 613 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 NOSTRINQ8IVI9 506 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 HSCBQ8IWL3 235 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 CKAP2LQ8IYA6 745 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 GLIS3Q8NEA6 775 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 TRAPPC12Q8WVT3 735 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 DHX38Q92620 1227 aaKnown RBP10.66□□□□□ -0.7
CLCN3-205ENST00000506924 HAS1Q92839 578 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 ATP6V0A1Q93050 837 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 RIT2Q99578 217 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 DUSP9Q99956 384 aaKnown RBP10.66□□□□□ -0.7
CLCN3-205ENST00000506924 GDF15Q99988 308 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 SEZ6LQ9BYH1 1024 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 FOXP1Q9H334 677 aaPredicted RBP10.66□□□□□ -0.7
CLCN3-205ENST00000506924 ZNF302Q9NR11 478 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 ERAP1Q9NZ08 941 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 GABBR1Q9UBS5 961 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 SOX13Q9UN79 622 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 KIF3AQ9Y496 699 aa10.66□□□□□ -0.7
CLCN3-205ENST00000506924 EMSYQ7Z589 1322 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 WDR64B1ANS9 1081 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 RNF225M0QZC1 329 aaPredicted RBP10.65□□□□□ -0.7
CLCN3-205ENST00000506924 GCFC2P16383 781 aaKnown RBP10.65□□□□□ -0.7
CLCN3-205ENST00000506924 DAB2P98082 770 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 FPGSQ05932 587 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 PPFIA1Q13136 1202 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 GRIK4Q16099 956 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 CALCRLQ16602 461 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 UGCGQ16739 394 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 FAM160B1Q5W0V3 765 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 NCAPH2Q6IBW4 605 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 C8orf86Q6ZUL3 223 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 MIER3Q7Z3K6 550 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 SESTD1Q86VW0 696 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 GIPC2Q8TF65 315 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 LMBR1Q8WVP7 490 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 SNX21Q969T3 373 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 BCO2Q9BYV7 579 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 WNT8AQ9H1J5 351 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 TMEM60Q9H2L4 133 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 KCNMB3Q9NPA1 279 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 DISC1Q9NRI5 854 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 PCDHA10Q9Y5I2 948 aa10.65□□□□□ -0.7
CLCN3-205ENST00000506924 IGKV6D-21A0A0A0MT36 114 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 VPS37CA5D8V6 355 aaPredicted RBP10.64□□□□□ -0.71
CLCN3-205ENST00000506924 NEMFO60524 1076 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 BAG4O95429 457 aaKnown RBP10.64□□□□□ -0.71
CLCN3-205ENST00000506924 INSRRP14616 1297 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 U2AF2P26368 475 aaKnown RBP eCLIP10.64□□□□□ -0.71
CLCN3-205ENST00000506924 THPOP40225 353 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 TXKP42681 527 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 TTC38Q5R3I4 469 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 C9orf50Q5SZB4 431 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 MFSD5Q6N075 450 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 RUFY4Q6ZNE9 571 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 PLPPR4Q7Z2D5 763 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 DEFB128Q7Z7B8 93 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 FERMT3Q86UX7 667 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 SMAP1Q8IYB5 467 aaPredicted RBP10.64□□□□□ -0.71
CLCN3-205ENST00000506924 TMEM199Q8N511 208 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 IL22RA1Q8N6P7 574 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 TRIM11Q96F44 468 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 NAP1L4Q99733 375 aaKnown RBP10.64□□□□□ -0.71
CLCN3-205ENST00000506924 PRO3102Q9H379 93 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 C12orf49Q9H741 205 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 ABCB6Q9NP58 842 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 PARP2Q9UGN5 583 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 VAV3Q9UKW4 847 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 PPME1Q9Y570 386 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 AK5Q9Y6K8 562 aa10.64□□□□□ -0.71
CLCN3-205ENST00000506924 SCN5AQ14524 2016 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 KAT6AQ92794 2004 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 TMEM238LA0A1B0GVL6 79 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 TMEM150BA6NC51 233 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 ZNF862O60290 1169 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 HSP90AA1P07900 732 aaKnown RBP10.63□□□□□ -0.71
CLCN3-205ENST00000506924 CTSHP09668 335 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 GNAT1P11488 350 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms