RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ADPGKQ9BRR6 497 aa20.03■□□□□ 0.8
PDLIM7-216ENST00000506537 TRIM9Q9C026 710 aa20.03■□□□□ 0.8
PDLIM7-216ENST00000506537 CDT1Q9H211 546 aa20.03■□□□□ 0.8
PDLIM7-216ENST00000506537 ALG13Q9NP73 1137 aaKnown RBP20.03■□□□□ 0.8
PDLIM7-216ENST00000506537 UBN1Q9NPG3 1134 aa20.03■□□□□ 0.8
PDLIM7-216ENST00000506537 MIOSQ9NXC5 875 aa20.03■□□□□ 0.8
PDLIM7-216ENST00000506537 SNTG2Q9NY99 539 aa20.03■□□□□ 0.8
PDLIM7-216ENST00000506537 PLAGL2Q9UPG8 496 aa20.03■□□□□ 0.8
PDLIM7-216ENST00000506537 GIT1Q9Y2X7 761 aa20.03■□□□□ 0.8
PDLIM7-216ENST00000506537 FAM237AA0A1B0GTK4 181 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 ACTN4O43707 911 aaKnown RBP20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 GTPBP6O43824 516 aaPredicted RBP20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 DNAJB1P25685 340 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 SCNN1GP51170 649 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 CAMK1Q14012 370 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 ZNF568Q3ZCX4 644 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 ZC2HC1CQ53FD0 456 aaPredicted RBP20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 KCNT2Q6UVM3 1135 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 ZNF280BQ86YH2 543 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 MICALL1Q8N3F8 863 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 CEP120Q8N960 986 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 SPPL3Q8TCT6 385 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 URGCPQ8TCY9 931 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 FGFBP2Q9BYJ0 223 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 CXCL16Q9H2A7 254 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 GOLPH3LQ9H4A5 285 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 ST6GALNAC4Q9H4F1 302 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 NRDE2Q9H7Z3 1164 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 MAGEF1Q9HAY2 307 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 AAASQ9NRG9 546 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 LMCD1Q9NZU5 365 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 KLK14Q9P0G3 267 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 DNAJB4Q9UDY4 337 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 TBX20Q9UMR3 447 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 PCDHB12Q9Y5F1 795 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 ZMYM2Q9UBW7 1377 aa20.02■□□□□ 0.8
PDLIM7-216ENST00000506537 A0A1W2PQ27 194 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 A0A1W2PQ64 194 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 A0A1W2PQD8 194 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 ZC3H11AO75152 810 aaKnown RBP eCLIP20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 PPP1R37O75864 691 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 RECQL4O94761 1208 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 DDHD2O94830 711 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 POMCP01189 267 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 IDEP14735 1019 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 GAP43P17677 238 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 CASP1P29466 404 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 BCAR1P56945 870 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 GTF2BQ00403 316 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 TPRNQ4KMQ1 711 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 CNNM4Q6P4Q7 775 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 MPZL3Q6UWV2 235 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 ZBTB33Q86T24 672 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 GRAMD1CQ8IYS0 662 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 HACE1Q8IYU2 909 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 MRPL38Q96DV4 380 aaKnown RBP20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 ZNF558Q96NG5 402 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 STRA6Q9BX79 667 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 HAPLN2Q9GZV7 340 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 GBP3Q9H0R5 595 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 TBC1D7Q9P0N9 293 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 SEL1LQ9UBV2 794 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 PARP2Q9UGN5 583 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 SERTAD1Q9UHV2 236 aa20.01■□□□□ 0.79
PDLIM7-216ENST00000506537 TDRD15B5MCY1 1934 aaKnown RBP20■□□□□ 0.79
PDLIM7-216ENST00000506537 TOM1L1O75674 476 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 FGF18O76093 207 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 PIGRP01833 764 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 NDUFA8P51970 172 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 RNASELQ05823 741 aaKnown RBP20■□□□□ 0.79
PDLIM7-216ENST00000506537 COASYQ13057 564 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 CCDC85BQ15834 202 aaPredicted RBP20■□□□□ 0.79
PDLIM7-216ENST00000506537 SLC39A4Q6P5W5 647 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 ZPBP2Q6X784 338 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 ZNF720Q7Z2F6 126 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 TMEM173Q86WV6 379 aaPredicted RBP20■□□□□ 0.79
PDLIM7-216ENST00000506537 MAP4K3Q8IVH8 894 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 THNSL1Q8IYQ7 743 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 SLC39A11Q8N1S5 342 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 FSIP1Q8NA03 581 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 PPM1EQ8WY54 764 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 C7orf25Q9BPX7 421 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 OLFML3Q9NRN5 406 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 PANK4Q9NVE7 773 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 ANKFY1Q9P2R3 1169 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 GDAQ9Y2T3 454 aa20■□□□□ 0.79
PDLIM7-216ENST00000506537 NT5C1B-RDH14C9J2C7 533 aa19.99■□□□□ 0.79
PDLIM7-216ENST00000506537 PTGESO14684 152 aa19.99■□□□□ 0.79
PDLIM7-216ENST00000506537 CSPG5O95196 566 aa19.99■□□□□ 0.79
PDLIM7-216ENST00000506537 SLFN14P0C7P3 912 aa19.99■□□□□ 0.79
PDLIM7-216ENST00000506537 MCF2P10911 925 aa19.99■□□□□ 0.79
PDLIM7-216ENST00000506537 SCP2P22307 547 aa19.99■□□□□ 0.79
PDLIM7-216ENST00000506537 GRM5P41594 1212 aa19.99■□□□□ 0.79
PDLIM7-216ENST00000506537 SLC11A1P49279 550 aa19.99■□□□□ 0.79
PDLIM7-216ENST00000506537 CASP5P51878 434 aa19.99■□□□□ 0.79
PDLIM7-216ENST00000506537 ASIC1P78348 528 aa19.99■□□□□ 0.79
PDLIM7-216ENST00000506537 DSC1Q08554 894 aa19.99■□□□□ 0.79
PDLIM7-216ENST00000506537 NOLC1Q14978 699 aaKnown RBP eCLIP19.99■□□□□ 0.79
PDLIM7-216ENST00000506537 CSPP1Q1MSJ5 1256 aa19.99■□□□□ 0.79
PDLIM7-216ENST00000506537 HERC4Q5GLZ8 1057 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms