RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 TAS1R3Q7RTX0 852 aa18.31■□□□□ 0.52
SNCA-209ENST00000506244 PPM1EQ8WY54 764 aa18.31■□□□□ 0.52
SNCA-209ENST00000506244 BICD1Q96G01 975 aa18.31■□□□□ 0.52
SNCA-209ENST00000506244 NSUN3Q9H649 340 aaKnown RBP18.31■□□□□ 0.52
SNCA-209ENST00000506244 SPG21Q9NZD8 308 aa18.31■□□□□ 0.52
SNCA-209ENST00000506244 STK39Q9UEW8 545 aa18.31■□□□□ 0.52
SNCA-209ENST00000506244 PARP2Q9UGN5 583 aa18.31■□□□□ 0.52
SNCA-209ENST00000506244 PUF60Q9UHX1 559 aaKnown RBP18.31■□□□□ 0.52
SNCA-209ENST00000506244 HNRNPDLO14979 420 aaKnown RBP18.3■□□□□ 0.52
SNCA-209ENST00000506244 GRM6O15303 877 aa18.3■□□□□ 0.52
SNCA-209ENST00000506244 NR1I2O75469 434 aa18.3■□□□□ 0.52
SNCA-209ENST00000506244 TOM1L1O75674 476 aa18.3■□□□□ 0.52
SNCA-209ENST00000506244 MCF2P10911 925 aa18.3■□□□□ 0.52
SNCA-209ENST00000506244 BCAR1P56945 870 aa18.3■□□□□ 0.52
SNCA-209ENST00000506244 PLCB3Q01970 1234 aa18.3■□□□□ 0.52
SNCA-209ENST00000506244 GRIK3Q13003 919 aa18.3■□□□□ 0.52
SNCA-209ENST00000506244 NOLC1Q14978 699 aaKnown RBP eCLIP18.3■□□□□ 0.52
SNCA-209ENST00000506244 SKIV2LQ15477 1246 aaKnown RBP18.3■□□□□ 0.52
SNCA-209ENST00000506244 CCDC85BQ15834 202 aaPredicted RBP18.3■□□□□ 0.52
SNCA-209ENST00000506244 EEF1DP3Q658K8 133 aa18.3■□□□□ 0.52
SNCA-209ENST00000506244 ADALQ6DHV7 355 aa18.3■□□□□ 0.52
SNCA-209ENST00000506244 HVCN1Q96D96 273 aa18.3■□□□□ 0.52
SNCA-209ENST00000506244 TMEM169Q96HH4 297 aa18.3■□□□□ 0.52
SNCA-209ENST00000506244 GAD1Q99259 594 aa18.3■□□□□ 0.52
SNCA-209ENST00000506244 TMEM175Q9BSA9 504 aa18.3■□□□□ 0.52
SNCA-209ENST00000506244 TCHPQ9BT92 498 aa18.3■□□□□ 0.52
SNCA-209ENST00000506244 TARS2Q9BW92 718 aaKnown RBP18.3■□□□□ 0.52
SNCA-209ENST00000506244 GBP3Q9H0R5 595 aa18.3■□□□□ 0.52
SNCA-209ENST00000506244 ALG13Q9NP73 1137 aaKnown RBP18.3■□□□□ 0.52
SNCA-209ENST00000506244 TOPORSQ9NS56 1045 aaPredicted RBP18.3■□□□□ 0.52
SNCA-209ENST00000506244 ANKFY1Q9P2R3 1169 aa18.3■□□□□ 0.52
SNCA-209ENST00000506244 CIZ1Q9ULV3 898 aaPredicted RBP18.3■□□□□ 0.52
SNCA-209ENST00000506244 POLR2DO15514 142 aaKnown RBP18.29■□□□□ 0.52
SNCA-209ENST00000506244 RECQL4O94761 1208 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 IDEP14735 1019 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 AKAP5P24588 427 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 LIG4P49917 911 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 SCNN1GP51170 649 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 YARSP54577 528 aaKnown RBP18.29■□□□□ 0.52
SNCA-209ENST00000506244 ALCAMQ13740 583 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 PDE12Q6L8Q7 609 aaKnown RBP18.29■□□□□ 0.52
SNCA-209ENST00000506244 SFR1Q86XK3 245 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 CCDC65Q8IXS2 484 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 CEP57L1Q8IYX8 460 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 SLC39A11Q8N1S5 342 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 SPPL3Q8TCT6 385 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 POF1BQ8WVV4 589 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 MRPS27Q92552 414 aaKnown RBP18.29■□□□□ 0.52
SNCA-209ENST00000506244 ZFP42Q96MM3 310 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 CCDC94Q9BW85 323 aaPredicted RBP18.29■□□□□ 0.52
SNCA-209ENST00000506244 CDT1Q9H211 546 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 RNF39Q9H2S5 420 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 ST6GALNAC4Q9H4F1 302 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 PTPRHQ9HD43 1115 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 TLR9Q9NR96 1032 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 OLFML3Q9NRN5 406 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 KBTBD4Q9NVX7 518 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 SNTG2Q9NY99 539 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 KCNH3Q9ULD8 1083 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 TBX20Q9UMR3 447 aa18.29■□□□□ 0.52
SNCA-209ENST00000506244 FSD2A1L4K1 749 aa18.28■□□□□ 0.52
SNCA-209ENST00000506244 POMCP01189 267 aa18.28■□□□□ 0.52
SNCA-209ENST00000506244 PROZP22891 400 aa18.28■□□□□ 0.52
SNCA-209ENST00000506244 CMA1P23946 247 aa18.28■□□□□ 0.52
SNCA-209ENST00000506244 GRM5P41594 1212 aa18.28■□□□□ 0.52
SNCA-209ENST00000506244 BMS1Q14692 1282 aaKnown RBP18.28■□□□□ 0.52
SNCA-209ENST00000506244 MAP4K3Q8IVH8 894 aa18.28■□□□□ 0.52
SNCA-209ENST00000506244 DNAJC19Q96DA6 116 aa18.28■□□□□ 0.52
SNCA-209ENST00000506244 NRDE2Q9H7Z3 1164 aa18.28■□□□□ 0.52
SNCA-209ENST00000506244 MRPL44Q9H9J2 332 aaKnown RBP18.28■□□□□ 0.52
SNCA-209ENST00000506244 USP25Q9UHP3 1055 aa18.28■□□□□ 0.52
SNCA-209ENST00000506244 USP20Q9Y2K6 914 aa18.28■□□□□ 0.52
SNCA-209ENST00000506244 COL6A3P12111 3177 aa18.28■□□□□ 0.52
SNCA-209ENST00000506244 PLXNA4Q9HCM2 1894 aa18.28■□□□□ 0.52
SNCA-209ENST00000506244 TDRD15B5MCY1 1934 aaKnown RBP18.27■□□□□ 0.52
SNCA-209ENST00000506244 FRMD3A2A2Y4 597 aa18.27■□□□□ 0.52
SNCA-209ENST00000506244 CLDN3O15551 220 aa18.27■□□□□ 0.52
SNCA-209ENST00000506244 PIGRP01833 764 aa18.27■□□□□ 0.52
SNCA-209ENST00000506244 PBX3P40426 434 aa18.27■□□□□ 0.52
SNCA-209ENST00000506244 MATR3P43243 847 aaKnown RBP eCLIP18.27■□□□□ 0.52
SNCA-209ENST00000506244 GTF2BQ00403 316 aa18.27■□□□□ 0.52
SNCA-209ENST00000506244 KYAT1Q16773 422 aa18.27■□□□□ 0.52
SNCA-209ENST00000506244 CNNM4Q6P4Q7 775 aa18.27■□□□□ 0.52
SNCA-209ENST00000506244 STXBP4Q6ZWJ1 553 aa18.27■□□□□ 0.52
SNCA-209ENST00000506244 FIZ1Q96SL8 496 aa18.27■□□□□ 0.52
SNCA-209ENST00000506244 TRIM9Q9C026 710 aa18.27■□□□□ 0.52
SNCA-209ENST00000506244 PANK4Q9NVE7 773 aa18.27■□□□□ 0.52
SNCA-209ENST00000506244 THEGQ9P2T0 379 aa18.27■□□□□ 0.52
SNCA-209ENST00000506244 COG5Q9UP83 839 aa18.27■□□□□ 0.52
SNCA-209ENST00000506244 GDAQ9Y2T3 454 aa18.27■□□□□ 0.52
SNCA-209ENST00000506244 A0A1W2PQ27 194 aa18.26■□□□□ 0.51
SNCA-209ENST00000506244 A0A1W2PQ64 194 aa18.26■□□□□ 0.51
SNCA-209ENST00000506244 A0A1W2PQD8 194 aa18.26■□□□□ 0.51
SNCA-209ENST00000506244 NCK2O43639 380 aa18.26■□□□□ 0.51
SNCA-209ENST00000506244 GALTP07902 379 aa18.26■□□□□ 0.51
SNCA-209ENST00000506244 PFKFB1P16118 471 aa18.26■□□□□ 0.51
SNCA-209ENST00000506244 NMT1P30419 496 aaKnown RBP18.26■□□□□ 0.51
SNCA-209ENST00000506244 SLC11A1P49279 550 aa18.26■□□□□ 0.51
SNCA-209ENST00000506244 ASIC1P78348 528 aa18.26■□□□□ 0.51
SNCA-209ENST00000506244 MCL1Q07820 350 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms