RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 FERMT3Q86UX7 667 aa9.18□□□□□ -0.94
SNF8-204ENST00000506104 COLGALT2Q8IYK4 626 aa9.18□□□□□ -0.94
SNF8-204ENST00000506104 SLC44A3Q8N4M1 653 aa9.18□□□□□ -0.94
SNF8-204ENST00000506104 SMG8Q8ND04 991 aaKnown RBP9.18□□□□□ -0.94
SNF8-204ENST00000506104 TRAIPQ9BWF2 469 aa9.18□□□□□ -0.94
SNF8-204ENST00000506104 FOXQ1Q9C009 403 aa9.18□□□□□ -0.94
SNF8-204ENST00000506104 CSRNP2Q9H175 543 aa9.18□□□□□ -0.94
SNF8-204ENST00000506104 NXF3Q9H4D5 531 aaKnown RBP9.18□□□□□ -0.94
SNF8-204ENST00000506104 WDR6Q9NNW5 1121 aaKnown RBP9.18□□□□□ -0.94
SNF8-204ENST00000506104 MIOSQ9NXC5 875 aa9.18□□□□□ -0.94
SNF8-204ENST00000506104 WRAP73Q9P2S5 460 aaPredicted RBP9.18□□□□□ -0.94
SNF8-204ENST00000506104 WNT16Q9UBV4 365 aa9.18□□□□□ -0.94
SNF8-204ENST00000506104 SIT1Q9Y3P8 196 aa9.18□□□□□ -0.94
SNF8-204ENST00000506104 RIF1Q5UIP0 2472 aaKnown RBP9.17□□□□□ -0.94
SNF8-204ENST00000506104 TRIP11Q15643 1979 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 SPTBN4Q9H254 2564 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 CYP3A7-CYP3A51PA0A087WV96 503 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 CASTOR2A6NHX0 329 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 LRRIQ4A6NIV6 560 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 CCL16O15467 120 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 ASAP2O43150 1006 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 TGM5O43548 720 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 TSPAN1O60635 241 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 SRFP11831 508 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 ATP2B1P20020 1258 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 FSHRP23945 695 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 CYP3A7P24462 503 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 NTHL1P78549 312 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 PPP2R5CQ13362 524 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 TOB2Q14106 344 aaPredicted RBP9.17□□□□□ -0.94
SNF8-204ENST00000506104 UBXN2BQ14CS0 331 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 EPHA7Q15375 998 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 USP41Q3LFD5 358 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 PPM1LQ5SGD2 360 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 LIN9Q5TKA1 542 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 FUT10Q6P4F1 479 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 ZC3H14Q6PJT7 736 aaKnown RBP9.17□□□□□ -0.94
SNF8-204ENST00000506104 DGLUCYQ7Z3D6 616 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 GRASPQ7Z6J2 395 aaPredicted RBP9.17□□□□□ -0.94
SNF8-204ENST00000506104 ASAP3Q8TDY4 903 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 FAM20AQ96MK3 541 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 GPR62Q9BZJ7 368 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 NT5C3AQ9H0P0 336 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 DHX33Q9H6R0 707 aaKnown RBP9.17□□□□□ -0.94
SNF8-204ENST00000506104 ZSWIM4Q9H7M6 989 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 ARHGEF3Q9NR81 526 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 GJB4Q9NTQ9 266 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 PDRG1Q9NUG6 133 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 SPATA6Q9NWH7 488 aaPredicted RBP9.17□□□□□ -0.94
SNF8-204ENST00000506104 ADAM28Q9UKQ2 775 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 VAV3Q9UKW4 847 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 NUMBLQ9Y6R0 609 aa9.17□□□□□ -0.94
SNF8-204ENST00000506104 NID2Q14112 1375 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 B4GALT5O43286 388 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 USO1O60763 962 aaKnown RBP9.16□□□□□ -0.94
SNF8-204ENST00000506104 LILRB3O75022 631 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 LRRN2O75325 713 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 CDKL5O76039 1030 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 LAMP2P13473 410 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 AXLP30530 894 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 HOXA11P31270 313 aaPredicted RBP9.16□□□□□ -0.94
SNF8-204ENST00000506104 DSG1Q02413 1049 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 SNW1Q13573 536 aaKnown RBP9.16□□□□□ -0.94
SNF8-204ENST00000506104 MXD4Q14582 209 aaPredicted RBP9.16□□□□□ -0.94
SNF8-204ENST00000506104 FAM171A1Q5VUB5 890 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 KIAA0319Q5VV43 1072 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 GALNT17Q6IS24 598 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 MOXD1Q6UVY6 613 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 ERMP1Q7Z2K6 904 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 HOMEZQ8IX15 550 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 C4orf19Q8IY42 314 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 DCLK2Q8N568 766 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 CMASQ8NFW8 434 aaPredicted RBP9.16□□□□□ -0.94
SNF8-204ENST00000506104 OXER1Q8TDS5 423 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 ING5Q8WYH8 240 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 NAP1L4Q99733 375 aaKnown RBP9.16□□□□□ -0.94
SNF8-204ENST00000506104 PRKD2Q9BZL6 878 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 POLR3FQ9H1D9 316 aaPredicted RBP9.16□□□□□ -0.94
SNF8-204ENST00000506104 PLEKHA4Q9H4M7 779 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 NCDNQ9UBB6 729 aa9.16□□□□□ -0.94
SNF8-204ENST00000506104 CACNA1IQ9P0X4 2223 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 FAM205CA6NFA0 338 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 SP9P0CG40 484 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 GCFC2P16383 781 aaKnown RBP9.15□□□□□ -0.94
SNF8-204ENST00000506104 ARF4P18085 180 aaPredicted RBP9.15□□□□□ -0.94
SNF8-204ENST00000506104 TXKP42681 527 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 PTENP60484 403 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 GPC5P78333 572 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 CAPSQ13938 189 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 HSP90AA2PQ14568 343 aaPredicted RBP9.15□□□□□ -0.94
SNF8-204ENST00000506104 PSMD5Q16401 504 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 SLC27A1Q6PCB7 646 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 PARM1Q6UWI2 310 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 B3GNT9Q6UX72 402 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 ZBTB8OSQ8IWT0 167 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 DAGLBQ8NCG7 672 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 PIGOQ8TEQ8 1089 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 KCNB2Q92953 911 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 ZNF707Q96C28 371 aaPredicted RBP9.15□□□□□ -0.94
SNF8-204ENST00000506104 RMDN1Q96DB5 314 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms