RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 MXD3Q9BW11 206 aa14.21□□□□□ -0.14
LETM1-203ENST00000505551 BRIP1Q9BX63 1249 aa14.21□□□□□ -0.14
LETM1-203ENST00000505551 UBA5Q9GZZ9 404 aa14.21□□□□□ -0.14
LETM1-203ENST00000505551 LARSQ9P2J5 1176 aaKnown RBP14.21□□□□□ -0.14
LETM1-203ENST00000505551 TMCC1O94876 653 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 GH1P01241 217 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 CALM1P0DP23 149 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 CALM2P0DP24 149 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 CALM3P0DP25 149 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 RARGP13631 454 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 RPL13P26373 211 aaKnown RBP14.2□□□□□ -0.14
LETM1-203ENST00000505551 RASSF2P50749 326 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 NPEPPSP55786 919 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 SESN3P58005 492 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 PTK2Q05397 1052 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 CCDC6Q16204 474 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 ZNF568Q3ZCX4 644 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 Q4G0T1 1027 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 SPDYAQ5MJ70 313 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 GALNT17Q6IS24 598 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 LRRC74BQ6ZQY2 392 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 C4orf50Q6ZRC1 276 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 ZNF571Q7Z3V5 609 aaPredicted RBP14.2□□□□□ -0.14
LETM1-203ENST00000505551 ANKRD42Q8N9B4 389 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 GDAP1Q8TB36 358 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 FAM81BQ96LP2 452 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 GANQ9H2C0 597 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 MLXIPLQ9NP71 852 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.2□□□□□ -0.14
LETM1-203ENST00000505551 DDX43Q9NXZ2 648 aaKnown RBP14.2□□□□□ -0.14
LETM1-203ENST00000505551 MTRF1LQ9UGC7 380 aaKnown RBP14.2□□□□□ -0.14
LETM1-203ENST00000505551 NAGPAQ9UK23 515 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 DIS3Q9Y2L1 958 aaKnown RBP14.2□□□□□ -0.14
LETM1-203ENST00000505551 PFASO15067 1338 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 POTEFA5A3E0 1075 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 APBA3O96018 575 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 SPATA31D3P0C874 917 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 POTEIP0CG38 1075 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 POTEJP0CG39 1038 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 TAC1P20366 129 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 MARK3P27448 753 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 SMARCA1P28370 1054 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 STIP1P31948 543 aaKnown RBP14.2□□□□□ -0.14
LETM1-203ENST00000505551 AMPD3Q01432 767 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 MPP3Q13368 585 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 FXNQ16595 210 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 POTEEQ6S8J3 1075 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 SPATA31D4Q6ZUB0 917 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 OTUD6AQ7L8S5 288 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 SRBD1Q8N5C6 995 aaKnown RBP14.2□□□□□ -0.14
LETM1-203ENST00000505551 KCNN1Q92952 543 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 SERPINB12Q96P63 405 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 ERVK-5Q9HDB9 667 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 CD209Q9NNX6 404 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 RASAL2Q9UJF2 1139 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 GGA1Q9UJY5 639 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 BZW2Q9Y6E2 419 aaKnown RBP14.2□□□□□ -0.14
LETM1-203ENST00000505551 USH1CQ9Y6N9 552 aa14.2□□□□□ -0.14
LETM1-203ENST00000505551 ARAP2Q8WZ64 1704 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 USP17L3A6NCW0 530 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 USP17L4A6NCW7 530 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 LYNP07948 512 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 CALML3P27482 149 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 PTGIRP43119 386 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 AP1B1Q10567 949 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 RCN1Q15293 331 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 PFKFB3Q16875 520 aaPredicted RBP14.19□□□□□ -0.14
LETM1-203ENST00000505551 LIN52Q52LA3 116 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 USP17L1Q7RTZ2 530 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 BLIDQ8IZY5 108 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 SNRNP27Q8WVK2 155 aaKnown RBP14.19□□□□□ -0.14
LETM1-203ENST00000505551 AK8Q96MA6 479 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 AGBL1Q96MI9 1066 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 RUNDC3BQ96NL0 473 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 LRRC37BQ96QE4 947 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 METTL14Q9HCE5 456 aaKnown RBP14.19□□□□□ -0.14
LETM1-203ENST00000505551 RHBDL2Q9NX52 303 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 PARP2Q9UGN5 583 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 INTUQ9ULD6 942 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 CASZ1Q86V15 1759 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 LAD1O00515 517 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 ZNF189O75820 626 aaPredicted RBP14.19□□□□□ -0.14
LETM1-203ENST00000505551 DDAH1O94760 285 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 ATP5DP30049 168 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 RPL21P46778 160 aaKnown RBP14.19□□□□□ -0.14
LETM1-203ENST00000505551 TFAP4Q01664 338 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 SLC34A1Q06495 639 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 DCAF12L1Q5VU92 463 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 ZNF804AQ7Z570 1209 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 IRF2BP2Q7Z5L9 587 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 NELFCDQ8IXH7 590 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 POLR3CQ9BUI4 534 aaPredicted RBP14.19□□□□□ -0.14
LETM1-203ENST00000505551 LRRC27Q9C0I9 530 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 UBAP1Q9NZ09 502 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 STARD13Q9Y3M8 1113 aa14.19□□□□□ -0.14
LETM1-203ENST00000505551 TNRC6CQ9HCJ0 1690 aaKnown RBP14.19□□□□□ -0.14
LETM1-203ENST00000505551 IRS2Q9Y4H2 1338 aa14.18□□□□□ -0.14
LETM1-203ENST00000505551 MAPK13O15264 365 aa14.18□□□□□ -0.14
LETM1-203ENST00000505551 DDX3YO15523 660 aaKnown RBP14.18□□□□□ -0.14
LETM1-203ENST00000505551 PTPN4P29074 926 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms