RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 TRAIPQ9BWF2 469 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 TNMDQ9H2S6 317 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 GOLPH3LQ9H4A5 285 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 KMT5AQ9NQR1 393 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 PRMT7Q9NVM4 692 aaPredicted RBP18.56■□□□□ 0.56
SYNE4-207ENST00000505054 KBTBD4Q9NVX7 518 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 DACT1Q9NYF0 836 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 KMT2EQ8IZD2 1858 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 PHLPP2Q6ZVD8 1323 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 CNTNAP2Q9UHC6 1331 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 A0A0U1RQF3 1178 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 SLC16A4O15374 487 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 ACTN4O43707 911 aaKnown RBP18.55■□□□□ 0.56
SYNE4-207ENST00000505054 FAM13AO94988 1023 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 ATF7P17544 494 aaPredicted RBP18.55■□□□□ 0.56
SYNE4-207ENST00000505054 ARF4P18085 180 aaPredicted RBP18.55■□□□□ 0.56
SYNE4-207ENST00000505054 EFNA5P52803 228 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 COASYQ13057 564 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 TPRNQ4KMQ1 711 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 UBXN11Q5T124 520 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 TWF2Q6IBS0 349 aaKnown RBP18.55■□□□□ 0.56
SYNE4-207ENST00000505054 TAS1R3Q7RTX0 852 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 ECHDC2Q86YB7 292 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 FSIP1Q8NA03 581 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 TMEM161BQ8NDZ6 487 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 POF1BQ8WVV4 589 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 PRIMPOLQ96LW4 560 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 PARVGQ9HBI0 331 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 TMEM161AQ9NX61 479 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 CLEC1BQ9P126 229 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 USP20Q9Y2K6 914 aa18.55■□□□□ 0.56
SYNE4-207ENST00000505054 ACKR2O00590 384 aa18.54■□□□□ 0.56
SYNE4-207ENST00000505054 TBCAO75347 108 aaKnown RBP18.54■□□□□ 0.56
SYNE4-207ENST00000505054 LIG1P18858 919 aa18.54■□□□□ 0.56
SYNE4-207ENST00000505054 AXLP30530 894 aa18.54■□□□□ 0.56
SYNE4-207ENST00000505054 NRIP1P48552 1158 aa18.54■□□□□ 0.56
SYNE4-207ENST00000505054 GATMP50440 423 aa18.54■□□□□ 0.56
SYNE4-207ENST00000505054 NDUFA8P51970 172 aa18.54■□□□□ 0.56
SYNE4-207ENST00000505054 NCKAP1LP55160 1127 aa18.54■□□□□ 0.56
SYNE4-207ENST00000505054 MAPK6Q16659 721 aa18.54■□□□□ 0.56
SYNE4-207ENST00000505054 ZNF598Q86UK7 904 aaKnown RBP18.54■□□□□ 0.56
SYNE4-207ENST00000505054 MRPS27Q92552 414 aaKnown RBP18.54■□□□□ 0.56
SYNE4-207ENST00000505054 EDAQ92838 391 aa18.54■□□□□ 0.56
SYNE4-207ENST00000505054 CCDC51Q96ER9 411 aa18.54■□□□□ 0.56
SYNE4-207ENST00000505054 FIZ1Q96SL8 496 aa18.54■□□□□ 0.56
SYNE4-207ENST00000505054 ELAC1Q9H777 363 aaKnown RBP18.54■□□□□ 0.56
SYNE4-207ENST00000505054 MAGEF1Q9HAY2 307 aa18.54■□□□□ 0.56
SYNE4-207ENST00000505054 FAM105AQ9NUU6 356 aa18.54■□□□□ 0.56
SYNE4-207ENST00000505054 RNF19AQ9NV58 838 aa18.54■□□□□ 0.56
SYNE4-207ENST00000505054 LARSQ9P2J5 1176 aaKnown RBP18.54■□□□□ 0.56
SYNE4-207ENST00000505054 SERTAD1Q9UHV2 236 aa18.54■□□□□ 0.56
SYNE4-207ENST00000505054 LRFN2Q9ULH4 789 aa18.54■□□□□ 0.56
SYNE4-207ENST00000505054 FRMD3A2A2Y4 597 aa18.53■□□□□ 0.56
SYNE4-207ENST00000505054 GLP2RO95838 553 aa18.53■□□□□ 0.56
SYNE4-207ENST00000505054 MAPTP10636 758 aaKnown RBP18.53■□□□□ 0.56
SYNE4-207ENST00000505054 NT5DC1Q5TFE4 455 aa18.53■□□□□ 0.56
SYNE4-207ENST00000505054 NOTUMQ6P988 496 aa18.53■□□□□ 0.56
SYNE4-207ENST00000505054 CDR2LQ86X02 465 aaPredicted RBP18.53■□□□□ 0.56
SYNE4-207ENST00000505054 MYCT1Q8N699 235 aa18.53■□□□□ 0.56
SYNE4-207ENST00000505054 PYM1Q9BRP8 204 aaKnown RBP18.53■□□□□ 0.56
SYNE4-207ENST00000505054 EIF2AQ9BY44 585 aaKnown RBP18.53■□□□□ 0.56
SYNE4-207ENST00000505054 TRIM9Q9C026 710 aa18.53■□□□□ 0.56
SYNE4-207ENST00000505054 ZHX3Q9H4I2 956 aa18.53■□□□□ 0.56
SYNE4-207ENST00000505054 TMEM134Q9H6X4 195 aa18.53■□□□□ 0.56
SYNE4-207ENST00000505054 PCDHB7Q9Y5E2 793 aa18.53■□□□□ 0.56
SYNE4-207ENST00000505054 A0A1B0GUA9 196 aa18.52■□□□□ 0.56
SYNE4-207ENST00000505054 FSD2A1L4K1 749 aa18.52■□□□□ 0.56
SYNE4-207ENST00000505054 LOC730098B7Z3J9 87 aa18.52■□□□□ 0.56
SYNE4-207ENST00000505054 K7ERI5 159 aa18.52■□□□□ 0.56
SYNE4-207ENST00000505054 SLFN14P0C7P3 912 aa18.52■□□□□ 0.56
SYNE4-207ENST00000505054 FGFR1P11362 822 aa18.52■□□□□ 0.56
SYNE4-207ENST00000505054 SYKP43405 635 aa18.52■□□□□ 0.56
SYNE4-207ENST00000505054 RAB27AP51159 221 aa18.52■□□□□ 0.56
SYNE4-207ENST00000505054 SMTNP53814 917 aa18.52■□□□□ 0.56
SYNE4-207ENST00000505054 UBE3AQ05086 875 aa18.52■□□□□ 0.56
SYNE4-207ENST00000505054 NCBP1Q09161 790 aaKnown RBP18.52■□□□□ 0.56
SYNE4-207ENST00000505054 PRPF4BQ13523 1007 aaKnown RBP18.52■□□□□ 0.56
SYNE4-207ENST00000505054 LONRF3Q496Y0 759 aa18.52■□□□□ 0.56
SYNE4-207ENST00000505054 BMP8AQ7Z5Y6 402 aa18.52■□□□□ 0.56
SYNE4-207ENST00000505054 SFR1Q86XK3 245 aa18.52■□□□□ 0.56
SYNE4-207ENST00000505054 GRAMD1CQ8IYS0 662 aa18.52■□□□□ 0.56
SYNE4-207ENST00000505054 KCNN1Q92952 543 aa18.52■□□□□ 0.56
SYNE4-207ENST00000505054 PDZD7Q9H5P4 517 aa18.52■□□□□ 0.56
SYNE4-207ENST00000505054 RNF216Q9NWF9 866 aaPredicted RBP18.52■□□□□ 0.56
SYNE4-207ENST00000505054 BARX2Q9UMQ3 279 aaPredicted RBP18.52■□□□□ 0.56
SYNE4-207ENST00000505054 PCDHB2Q9Y5E7 798 aa18.52■□□□□ 0.56
SYNE4-207ENST00000505054 MEIS3P2A8K0S8 358 aa18.51■□□□□ 0.55
SYNE4-207ENST00000505054 TRAK2O60296 914 aa18.51■□□□□ 0.55
SYNE4-207ENST00000505054 ZNF623O75123 536 aa18.51■□□□□ 0.55
SYNE4-207ENST00000505054 CASP1P29466 404 aa18.51■□□□□ 0.55
SYNE4-207ENST00000505054 CBX2Q14781 532 aaPredicted RBP18.51■□□□□ 0.55
SYNE4-207ENST00000505054 EEF1DP3Q658K8 133 aa18.51■□□□□ 0.55
SYNE4-207ENST00000505054 CNNM4Q6P4Q7 775 aa18.51■□□□□ 0.55
SYNE4-207ENST00000505054 HAUS6Q7Z4H7 955 aa18.51■□□□□ 0.55
SYNE4-207ENST00000505054 RNF169Q8NCN4 708 aa18.51■□□□□ 0.55
SYNE4-207ENST00000505054 LPPQ93052 612 aa18.51■□□□□ 0.55
SYNE4-207ENST00000505054 LRRC27Q9C0I9 530 aa18.51■□□□□ 0.55
SYNE4-207ENST00000505054 AAASQ9NRG9 546 aa18.51■□□□□ 0.55
SYNE4-207ENST00000505054 KCNG1Q9UIX4 513 aa18.51■□□□□ 0.55
SYNE4-207ENST00000505054 USP15Q9Y4E8 981 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms