RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 NAP1L2Q9ULW6 460 aaPredicted RBP5.55□□□□□ -1.52
CDH9-203ENST00000505045 RALGAPA2Q2PPJ7 1873 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 FAM86B1E9PN63 330 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 EDIL3O43854 480 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 STAM2O75886 525 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 FAM86B2P0C5J1 330 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 RFC2P35250 354 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 THPOP40225 353 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 ADCY7P51828 1080 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 TAP1Q03518 808 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 EHHADHQ08426 723 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 TRAF1Q13077 416 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 ZNF211Q13398 564 aaPredicted RBP5.54□□□□□ -1.52
CDH9-203ENST00000505045 KRT32Q14532 448 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 RAB30Q15771 203 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 PFKFB3Q16875 520 aaPredicted RBP5.54□□□□□ -1.52
CDH9-203ENST00000505045 KCNV1Q6PIU1 500 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 BLOC1S2Q6QNY1 142 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.54□□□□□ -1.52
CDH9-203ENST00000505045 HERC6Q8IVU3 1022 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 RPUSD2Q8IZ73 545 aaKnown RBP5.54□□□□□ -1.52
CDH9-203ENST00000505045 SNX29Q8TEQ0 813 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 TRAPPC12Q8WVT3 735 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 PPM1EQ8WY54 764 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 ATP6V0A1Q93050 837 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 GPRASP2Q96D09 838 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 AIFM3Q96NN9 605 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 SENP7Q9BQF6 1050 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 RIC8AQ9NPQ8 531 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 KCNH7Q9NS40 1196 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 RBM28Q9NW13 759 aaKnown RBP5.54□□□□□ -1.52
CDH9-203ENST00000505045 TTC3P53804 2025 aa5.54□□□□□ -1.52
CDH9-203ENST00000505045 IGLV3-22A0A075B6J6 115 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 C17orf102A2RUQ5 167 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 SMCO2A6NFE2 343 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 DDX39AO00148 427 aaKnown RBP5.53□□□□□ -1.52
CDH9-203ENST00000505045 DDX3YO15523 660 aaKnown RBP5.53□□□□□ -1.52
CDH9-203ENST00000505045 LPXNO60711 386 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 ICMTO60725 284 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 CCNE2O96020 404 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 SCG2P13521 617 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 SREBF1P36956 1147 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 CCT2P78371 535 aaKnown RBP5.53□□□□□ -1.52
CDH9-203ENST00000505045 ARHGAP4P98171 946 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 NEDD9Q14511 834 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 CCDC85BQ15834 202 aaPredicted RBP5.53□□□□□ -1.52
CDH9-203ENST00000505045 MARCH8Q5T0T0 291 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 PEAR1Q5VY43 1037 aaPredicted RBP5.53□□□□□ -1.52
CDH9-203ENST00000505045 JAKMIP3Q5VZ66 844 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 FAM117BQ6P1L5 589 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 CNKSR3Q6P9H4 555 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 ARMC10Q8N2F6 343 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 RETREG2Q8NC44 543 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 DBF4BQ8NFT6 615 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 SLC9A7Q96T83 725 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 USP26Q9BXU7 913 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 MTIF3Q9H2K0 278 aaKnown RBP5.53□□□□□ -1.52
CDH9-203ENST00000505045 SLC28A3Q9HAS3 691 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 JADE2Q9NQC1 790 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 VPS54Q9P1Q0 977 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 MSRAQ9UJ68 235 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 MTUS1Q9ULD2 1270 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 PCDHA11Q9Y5I1 949 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 EMSYQ7Z589 1322 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 ARID2Q68CP9 1835 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.53□□□□□ -1.52
CDH9-203ENST00000505045 BAIAP3O94812 1187 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 GJB5O95377 273 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 CHRNA1P02708 482 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 HMGB1P09429 215 aaKnown RBP5.53□□□□□ -1.52
CDH9-203ENST00000505045 PDIA3P30101 505 aaKnown RBP5.53□□□□□ -1.52
CDH9-203ENST00000505045 CDC25BP30305 580 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 RCAN1P53805 252 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 EVCP57679 992 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 FGD1P98174 961 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 MGAT3Q09327 533 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 NPY5RQ15761 445 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 CEP55Q53EZ4 464 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 PLEKHG4Q58EX7 1191 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 HGSNATQ68CP4 663 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 XRRA1Q6P2D8 792 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 SYNE3Q6ZMZ3 975 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 ACAD11Q709F0 780 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 NLRX1Q86UT6 975 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 CCDC60Q8IWA6 550 aaPredicted RBP5.53□□□□□ -1.52
CDH9-203ENST00000505045 FBXL16Q8N461 479 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 GDPD5Q8WTR4 605 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 ARNTL2Q8WYA1 636 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 GJA10Q969M2 543 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 LENG9Q96B70 501 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 FAM46AQ96IP4 442 aaKnown RBP5.53□□□□□ -1.52
CDH9-203ENST00000505045 OSMRQ99650 979 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 MXRA8Q9BRK3 442 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 BHLHE41Q9C0J9 482 aaPredicted RBP5.53□□□□□ -1.52
CDH9-203ENST00000505045 AGO4Q9HCK5 861 aaKnown RBP5.53□□□□□ -1.52
CDH9-203ENST00000505045 GJB4Q9NTQ9 266 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 RNF112Q9ULX5 631 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 PLXNA4Q9HCM2 1894 aa5.53□□□□□ -1.52
CDH9-203ENST00000505045 FNDC1Q4ZHG4 1894 aaPredicted RBP5.52□□□□□ -1.53
CDH9-203ENST00000505045 ESYT2A0FGR8 921 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms