RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 SWSAP1Q6NVH7 229 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 EFCAB12Q6NXP0 572 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 ZNF410Q86VK4 478 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 METTL13Q8N6R0 699 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 CNNM3Q8NE01 707 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 PIBF1Q8WXW3 757 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 MAP4K1Q92918 833 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 LOXL4Q96JB6 756 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 HERC2P3Q9BVR0 1158 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 GCOM2Q9BZD3 368 aaPredicted RBP6.79□□□□□ -1.32
GYPB-204ENST00000504951 CHRDQ9H2X0 955 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 UBN1Q9NPG3 1134 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 RIC8AQ9NPQ8 531 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 AVENQ9NQS1 362 aaPredicted RBP6.79□□□□□ -1.32
GYPB-204ENST00000504951 NRBP2Q9NSY0 501 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 SEMA4GQ9NTN9 838 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 FAM105AQ9NUU6 356 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 RAB23Q9ULC3 237 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 KCNH3Q9ULD8 1083 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 FAN1Q9Y2M0 1017 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 PCDHA10Q9Y5I2 948 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 MIA3Q5JRA6 1907 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 SHISA7A6NL88 538 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 hCG_1984214I3L0E3 225 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 MAN2B1O00754 1011 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 NRP1O14786 923 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 BACH1O14867 736 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 GAS2O43903 313 aaKnown RBP6.78□□□□□ -1.32
GYPB-204ENST00000504951 ECI2O75521 394 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 ZMYND10O75800 440 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 DDHD2O94830 711 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 URODP06132 367 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 CALM1P0DP23 149 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 CALM2P0DP24 149 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 CALM3P0DP25 149 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 LIFRP42702 1097 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 CLK2P49760 499 aaKnown RBP6.78□□□□□ -1.32
GYPB-204ENST00000504951 ANTXR2P58335 489 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 DSC1Q08554 894 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 AP3B2Q13367 1082 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 SNW1Q13573 536 aaKnown RBP6.78□□□□□ -1.32
GYPB-204ENST00000504951 PCBP1Q15365 356 aaKnown RBP eCLIP6.78□□□□□ -1.322e-29■■■■■ 27.7
GYPB-204ENST00000504951 TARBP2Q15633 366 aaKnown RBP6.78□□□□□ -1.32
GYPB-204ENST00000504951 UVSSAQ2YD98 709 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 ZNF852Q6ZMS4 543 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 PRR23CQ6ZRP0 262 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 ZNF280BQ86YH2 543 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 SRBD1Q8N5C6 995 aaKnown RBP6.78□□□□□ -1.32
GYPB-204ENST00000504951 ZNF713Q8N859 430 aaPredicted RBP6.78□□□□□ -1.32
GYPB-204ENST00000504951 CTCFLQ8NI51 663 aaPredicted RBP6.78□□□□□ -1.32
GYPB-204ENST00000504951 DNASE1L2Q92874 299 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 FGF14Q92915 247 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 PHKBQ93100 1093 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 SPSB2Q99619 263 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 MYL10Q9BUA6 226 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 RPP25Q9BUL9 199 aaKnown RBP6.78□□□□□ -1.32
GYPB-204ENST00000504951 NIFKQ9BYG3 293 aaKnown RBP6.78□□□□□ -1.32
GYPB-204ENST00000504951 RXFP3Q9NSD7 469 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 DNAJB4Q9UDY4 337 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 AKT3Q9Y243 479 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 MTF2Q9Y483 593 aaPredicted RBP6.78□□□□□ -1.32
GYPB-204ENST00000504951 F5P12259 2224 aa6.78□□□□□ -1.32
GYPB-204ENST00000504951 IGLV3-22A0A075B6J6 115 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.77□□□□□ -1.33
GYPB-204ENST00000504951 E7EWF7 191 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 IPO5O00410 1097 aaKnown RBP6.77□□□□□ -1.33
GYPB-204ENST00000504951 TGM5O43548 720 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 LRRN2O75325 713 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 RFPL2O75678 378 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 MICAL2O94851 1124 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 PSAPP07602 524 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 IBSPP21815 317 aaPredicted RBP6.77□□□□□ -1.33
GYPB-204ENST00000504951 SFPQP23246 707 aaKnown RBP eCLIP6.77□□□□□ -1.33
GYPB-204ENST00000504951 FSHRP23945 695 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 CHMLP26374 656 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 TARSP26639 723 aaKnown RBP6.77□□□□□ -1.33
GYPB-204ENST00000504951 CA8P35219 290 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 RPIAP49247 311 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 GLUD2P49448 558 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 CCR3P51677 355 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 CLCN3P51790 818 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 RNASELQ05823 741 aaKnown RBP6.77□□□□□ -1.33
GYPB-204ENST00000504951 SPEM2Q0P670 501 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 TTC22Q5TAA0 569 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 N4BP2L1Q5TBK1 243 aaPredicted RBP6.77□□□□□ -1.33
GYPB-204ENST00000504951 C1orf228Q6PIY5 440 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 PARM1Q6UWI2 310 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 TREML4Q6UXN2 200 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 AGMOQ6ZNB7 445 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 SCUBE3Q8IX30 993 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 COLGALT2Q8IYK4 626 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 ZNF654Q8IZM8 581 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 CMTR1Q8N1G2 835 aaKnown RBP6.77□□□□□ -1.33
GYPB-204ENST00000504951 RNF169Q8NCN4 708 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 RDM1Q8NG50 284 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 NCOA7Q8NI08 942 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 URGCPQ8TCY9 931 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 YTHDC1Q96MU7 727 aaKnown RBP6.77□□□□□ -1.33
GYPB-204ENST00000504951 CEP89Q96ST8 783 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 LSM14BQ9BX40 385 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms