RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 NCLP19338 710 aaKnown RBP14.6□□□□□ -0.07
DDX41-204ENST00000504807 PPM1AP35813 382 aa14.6□□□□□ -0.07
DDX41-204ENST00000504807 GLB1LQ6UWU2 654 aa14.6□□□□□ -0.07
DDX41-204ENST00000504807 TAS1R1Q7RTX1 841 aa14.6□□□□□ -0.07
DDX41-204ENST00000504807 VPS52Q8N1B4 723 aa14.6□□□□□ -0.07
DDX41-204ENST00000504807 C12orf76Q8N812 135 aaPredicted RBP14.6□□□□□ -0.07
DDX41-204ENST00000504807 TDRD5Q8NAT2 981 aaKnown RBP14.6□□□□□ -0.07
DDX41-204ENST00000504807 GSTCDQ8NEC7 633 aa14.6□□□□□ -0.07
DDX41-204ENST00000504807 TCP11Q8WWU5 503 aa14.6□□□□□ -0.07
DDX41-204ENST00000504807 ZFP42Q96MM3 310 aa14.6□□□□□ -0.07
DDX41-204ENST00000504807 MRPL9Q9BYD2 267 aaKnown RBP14.6□□□□□ -0.07
DDX41-204ENST00000504807 FOXP1Q9H334 677 aaPredicted RBP14.6□□□□□ -0.07
DDX41-204ENST00000504807 NXF3Q9H4D5 531 aaKnown RBP14.6□□□□□ -0.07
DDX41-204ENST00000504807 RSAD1Q9HA92 442 aa14.6□□□□□ -0.07
DDX41-204ENST00000504807 FBXL21Q9UKT6 434 aa14.6□□□□□ -0.07
DDX41-204ENST00000504807 FAM208BQ5VWN6 2430 aa14.6□□□□□ -0.07
DDX41-204ENST00000504807 DCDC2BA2VCK2 349 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 PP2D1A8MPX8 630 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 INO80B-WBP1J3KQ70 363 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 STK25O00506 426 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 GAS2O43903 313 aaKnown RBP14.59□□□□□ -0.07
DDX41-204ENST00000504807 DGAT1O75907 488 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 CXCL14O95715 111 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 OR52Z1P0C646 297 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 EPCAMP16422 314 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 HOXB8P17481 243 aaPredicted RBP14.59□□□□□ -0.07
DDX41-204ENST00000504807 MLH1P40692 756 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 RAB27AP51159 221 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 SMC1AQ14683 1233 aaKnown RBP14.59□□□□□ -0.07
DDX41-204ENST00000504807 TTC38Q5R3I4 469 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 PDE12Q6L8Q7 609 aaKnown RBP14.59□□□□□ -0.07
DDX41-204ENST00000504807 CES5AQ6NT32 575 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 DDX53Q86TM3 631 aaKnown RBP14.59□□□□□ -0.07
DDX41-204ENST00000504807 NOSTRINQ8IVI9 506 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 SIX5Q8N196 739 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 SLC22A17Q8WUG5 538 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 NECTIN4Q96NY8 510 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 GAD1Q99259 594 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 NGRNQ9NPE2 291 aaKnown RBP14.59□□□□□ -0.07
DDX41-204ENST00000504807 PUF60Q9UHX1 559 aaKnown RBP14.59□□□□□ -0.07
DDX41-204ENST00000504807 PCDHB6Q9Y5E3 794 aa14.59□□□□□ -0.07
DDX41-204ENST00000504807 FASNP49327 2511 aaKnown RBP14.59□□□□□ -0.07
DDX41-204ENST00000504807 MYO10Q9HD67 2058 aa14.58□□□□□ -0.08
DDX41-204ENST00000504807 NRP1O14786 923 aa14.58□□□□□ -0.08
DDX41-204ENST00000504807 INPPL1O15357 1258 aa14.58□□□□□ -0.08
DDX41-204ENST00000504807 ASAP2O43150 1006 aa14.58□□□□□ -0.08
DDX41-204ENST00000504807 LILRB3O75022 631 aa14.58□□□□□ -0.08
DDX41-204ENST00000504807 SKIP12755 728 aa14.58□□□□□ -0.08
DDX41-204ENST00000504807 AKAP5P24588 427 aa14.58□□□□□ -0.08
DDX41-204ENST00000504807 U2AF2P26368 475 aaKnown RBP eCLIP14.58□□□□□ -0.08
DDX41-204ENST00000504807 ALDH7A1P49419 539 aaKnown RBP14.58□□□□□ -0.08
DDX41-204ENST00000504807 SCNN1GP51170 649 aa14.58□□□□□ -0.08
DDX41-204ENST00000504807 KRT17Q04695 432 aa14.58□□□□□ -0.08
DDX41-204ENST00000504807 PTPN14Q15678 1187 aa14.58□□□□□ -0.08
DDX41-204ENST00000504807 ZC3H14Q6PJT7 736 aaKnown RBP14.58□□□□□ -0.08
DDX41-204ENST00000504807 COLGALT2Q8IYK4 626 aa14.58□□□□□ -0.08
DDX41-204ENST00000504807 RABGGTAQ92696 567 aa14.58□□□□□ -0.08
DDX41-204ENST00000504807 COL26A1Q96A83 441 aa14.58□□□□□ -0.08
DDX41-204ENST00000504807 POLR3CQ9BUI4 534 aaPredicted RBP14.58□□□□□ -0.08
DDX41-204ENST00000504807 KIFC3Q9BVG8 833 aa14.58□□□□□ -0.08
DDX41-204ENST00000504807 APOL6Q9BWW8 343 aa14.58□□□□□ -0.08
DDX41-204ENST00000504807 CSRNP2Q9H175 543 aa14.58□□□□□ -0.08
DDX41-204ENST00000504807 TUFT1Q9NNX1 390 aa14.58□□□□□ -0.08
DDX41-204ENST00000504807 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.57□□□□□ -0.08
DDX41-204ENST00000504807 ARL5CA6NH57 179 aa14.57□□□□□ -0.08
DDX41-204ENST00000504807 ERLIN2O94905 339 aa14.57□□□□□ -0.08
DDX41-204ENST00000504807 SSBP05455 408 aaKnown RBP eCLIP14.57□□□□□ -0.08
DDX41-204ENST00000504807 CENPBP07199 599 aaPredicted RBP14.57□□□□□ -0.08
DDX41-204ENST00000504807 CTSAP10619 480 aa14.57□□□□□ -0.08
DDX41-204ENST00000504807 HOXB3P14651 431 aaPredicted RBP14.57□□□□□ -0.08
DDX41-204ENST00000504807 IGFBP6P24592 240 aaPredicted RBP14.57□□□□□ -0.08
DDX41-204ENST00000504807 RPA1P27694 616 aa14.57□□□□□ -0.08
DDX41-204ENST00000504807 RNASELQ05823 741 aaKnown RBP14.57□□□□□ -0.08
DDX41-204ENST00000504807 POU5F1BQ06416 359 aa14.57□□□□□ -0.08
DDX41-204ENST00000504807 DSC1Q08554 894 aa14.57□□□□□ -0.08
DDX41-204ENST00000504807 MXD4Q14582 209 aaPredicted RBP14.57□□□□□ -0.08
DDX41-204ENST00000504807 ACAP1Q15027 740 aa14.57□□□□□ -0.08
DDX41-204ENST00000504807 TPRNQ4KMQ1 711 aa14.57□□□□□ -0.08
DDX41-204ENST00000504807 CDCA2Q69YH5 1023 aaPredicted RBP14.57□□□□□ -0.08
DDX41-204ENST00000504807 KCNK18Q7Z418 384 aa14.57□□□□□ -0.08
DDX41-204ENST00000504807 EXOC8Q8IYI6 725 aa14.57□□□□□ -0.08
DDX41-204ENST00000504807 RNF168Q8IYW5 571 aaPredicted RBP14.57□□□□□ -0.08
DDX41-204ENST00000504807 ZDHHC14Q8IZN3 488 aa14.57□□□□□ -0.08
DDX41-204ENST00000504807 PGBD4Q96DM1 585 aa14.57□□□□□ -0.08
DDX41-204ENST00000504807 TMEM169Q96HH4 297 aa14.57□□□□□ -0.08
DDX41-204ENST00000504807 B3GALT6Q96L58 329 aa14.57□□□□□ -0.08
DDX41-204ENST00000504807 ZSCAN31Q96LW9 406 aaPredicted RBP14.57□□□□□ -0.08
DDX41-204ENST00000504807 NFKBIZQ9BYH8 718 aa14.57□□□□□ -0.08
DDX41-204ENST00000504807 ADAM7Q9H2U9 754 aa14.57□□□□□ -0.08
DDX41-204ENST00000504807 DBR1Q9UK59 544 aaKnown RBP14.57□□□□□ -0.08
DDX41-204ENST00000504807 NPTXRO95502 500 aa14.56□□□□□ -0.08
DDX41-204ENST00000504807 ADRB1P08588 477 aa14.56□□□□□ -0.08
DDX41-204ENST00000504807 ITGA4P13612 1032 aa14.56□□□□□ -0.08
DDX41-204ENST00000504807 SDHBP21912 280 aa14.56□□□□□ -0.08
DDX41-204ENST00000504807 RFX1P22670 979 aa14.56□□□□□ -0.08
DDX41-204ENST00000504807 CDC25AP30304 524 aa14.56□□□□□ -0.08
DDX41-204ENST00000504807 CA8P35219 290 aa14.56□□□□□ -0.08
DDX41-204ENST00000504807 SAFBQ15424 915 aaKnown RBP eCLIP14.56□□□□□ -0.08
DDX41-204ENST00000504807 EEF1DP3Q658K8 133 aa14.56□□□□□ -0.08
DDX41-204ENST00000504807 PADI6Q6TGC4 694 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms