RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 RAB24Q969Q5 203 aa6.29□□□□□ -1.4
TRAPPC13-205ENST00000504243 C1GALT1C1Q96EU7 318 aa6.29□□□□□ -1.4
TRAPPC13-205ENST00000504243 OR10A2Q9H208 303 aa6.29□□□□□ -1.4
TRAPPC13-205ENST00000504243 FAM204AQ9H8W3 233 aa6.29□□□□□ -1.4
TRAPPC13-205ENST00000504243 SLC52A1Q9NWF4 448 aa6.29□□□□□ -1.4
TRAPPC13-205ENST00000504243 SCOCQ9UIL1 159 aa6.29□□□□□ -1.4
TRAPPC13-205ENST00000504243 FAM50BQ9Y247 325 aa6.29□□□□□ -1.4
TRAPPC13-205ENST00000504243 IPPQ9Y573 584 aa6.29□□□□□ -1.4
TRAPPC13-205ENST00000504243 C2orf78A6NCI8 922 aa6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 NBPF7P0C2Y1 421 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 KIR2DL3P43628 341 aa6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 ACAP1Q15027 740 aa6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 GJC2Q5T442 439 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 AGBL4Q5VU57 503 aa6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 ARHGEF18Q6ZSZ5 1173 aa6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 USP30Q70CQ3 517 aa6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 TTC7BQ86TV6 843 aa6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 DENND1CQ8IV53 801 aa6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 PQLC1Q8N2U9 271 aa6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 MSL3Q8N5Y2 521 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 ZNF480Q8WV37 535 aa6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 RUNDC1Q96C34 613 aa6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 SLC7A6OSQ96CW6 309 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 RPL10LQ96L21 214 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 FAM193BQ96PV7 902 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 SENP6Q9GZR1 1112 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 MANSC1Q9H8J5 431 aa6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 KMT5AQ9NQR1 393 aa6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 MAN1C1Q9NR34 630 aa6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 NR2E1Q9Y466 385 aa6.28□□□□□ -1.4
TRAPPC13-205ENST00000504243 PRICKLE3O43900 615 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 B4GALT4O60513 344 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 TOX4O94842 621 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 PLATP00750 562 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 FTLP02792 175 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 SYN1P17600 705 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 PTPN7P35236 360 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 WASP42768 502 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 PPP2CBP62714 309 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 PPP2CAP67775 309 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 DUSP2Q05923 314 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 GBX1Q14549 363 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 SEPT2Q15019 361 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 COBLL1Q53SF7 1204 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 C19orf54Q5BKX5 351 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 THEMIS2Q5TEJ8 643 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 CCDC149Q6ZUS6 474 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 PRR18Q8N4B5 295 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 ANKRD53Q8N9V6 530 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 FBXO18Q8NFZ0 1043 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 LPPQ93052 612 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 TTC17Q96AE7 1141 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 EPC1Q9H2F5 836 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 C12orf65Q9H3J6 166 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 LDAHQ9H6V9 325 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 ARNT2Q9HBZ2 717 aa6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 CTDP1Q9Y5B0 961 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 CFAP20Q9Y6A4 193 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-205ENST00000504243 ZNF536O15090 1300 aa6.26□□□□□ -1.41
TRAPPC13-205ENST00000504243 LAMTOR5O43504 91 aa6.26□□□□□ -1.41
TRAPPC13-205ENST00000504243 PEX14O75381 377 aa6.26□□□□□ -1.41
TRAPPC13-205ENST00000504243 HDAC1Q13547 482 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC13-205ENST00000504243 GADL1Q6ZQY3 521 aa6.26□□□□□ -1.41
TRAPPC13-205ENST00000504243 Q6ZVL8 140 aa6.26□□□□□ -1.41
TRAPPC13-205ENST00000504243 DAAM2Q86T65 1068 aa6.26□□□□□ -1.41
TRAPPC13-205ENST00000504243 OR5M3Q8NGP4 307 aa6.26□□□□□ -1.41
TRAPPC13-205ENST00000504243 STON2Q8WXE9 905 aa6.26□□□□□ -1.41
TRAPPC13-205ENST00000504243 RGMAQ96B86 450 aa6.26□□□□□ -1.41
TRAPPC13-205ENST00000504243 TMX3Q96JJ7 454 aa6.26□□□□□ -1.41
TRAPPC13-205ENST00000504243 CLPTM1LQ96KA5 538 aa6.26□□□□□ -1.41
TRAPPC13-205ENST00000504243 CDC5LQ99459 802 aaKnown RBP6.26□□□□□ -1.41
TRAPPC13-205ENST00000504243 CNOT11Q9UKZ1 510 aaKnown RBP6.26□□□□□ -1.41
TRAPPC13-205ENST00000504243 SLC4A7Q9Y6M7 1214 aa6.26□□□□□ -1.41
TRAPPC13-205ENST00000504243 ARID4BQ4LE39 1312 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 FOXD2O60548 495 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 ITGA10O75578 1167 aa6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 UBXN7O94888 489 aa6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 ALDH2P05091 517 aa6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 JUNP05412 331 aaKnown RBP6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 HTR1BP28222 390 aa6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 EPHB4P54760 987 aa6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 MST1LQ2TV78 715 aa6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 TBC1D10BQ4KMP7 808 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 SH2D3CQ8N5H7 860 aa6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 CGRRF1Q99675 332 aa6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 SLC6A15Q9H2J7 730 aa6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 BCO1Q9HAY6 547 aa6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 JADE2Q9NQC1 790 aa6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 LANCL2Q9NS86 450 aa6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 TMEM140Q9NV12 185 aa6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 GPRC5DQ9NZD1 345 aa6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 PUF60Q9UHX1 559 aaKnown RBP6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 PCDHB1Q9Y5F3 818 aa6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 NR2E3Q9Y5X4 410 aa6.25□□□□□ -1.41
TRAPPC13-205ENST00000504243 LRRC14BA6NHZ5 514 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 H3BML4 177 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 ARHGAP6O43182 974 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 ADCY6O43306 1168 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms