RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 INPP5FQ9Y2H2 1132 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 DIP2BQ9P265 1576 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 REREQ9P2R6 1566 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 AFF2P51816 1311 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 PDS5AQ29RF7 1337 aaKnown RBP17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 PYGBP11216 843 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 FRA10AC1Q70Z53 315 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 ABT1Q9ULW3 272 aaKnown RBP17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 HPCAL4Q9UM19 191 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 SNX12Q9UMY4 172 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 HAUS5O94927 633 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 CSF1RP07333 972 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 FAM102AQ5T9C2 384 aaPredicted RBP17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 ZBED8Q8IZ13 594 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 DPF2Q92785 391 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 CRAMP1Q96RY5 1269 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 BFARQ9NZS9 450 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 SSU72P8A0A1W2PR75 194 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 SNX2O60749 519 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 AP1ARQ63HQ0 302 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 TTC8Q8TAM2 541 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 RNPC3Q96LT9 517 aaKnown RBP17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 SLC18A3Q16572 532 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 IZUMO3Q5VZ72 239 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 RPAP3Q9H6T3 665 aaPredicted RBP17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 DAGLAQ9Y4D2 1042 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 PI4K2BG5E9Z4 385 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 NMT1P30419 496 aaKnown RBP17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 ZNF34Q8IZ26 560 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 ST13P4Q8IZP2 240 aaPredicted RBP17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 CXorf38Q8TB03 319 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 PIP4K2CQ8TBX8 421 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 LRRC37BQ96QE4 947 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 SUDS3Q9H7L9 328 aaPredicted RBP17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 JPH1Q9HDC5 661 aaPredicted RBP17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 KCND2Q9NZV8 630 aa17.54■□□□□ 0.4
PCDHA1-203ENST00000504120 FLT1P17948 1338 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 H3BRJ5 948 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 BNIP3LO60238 219 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 SYDE1Q6ZW31 735 aaPredicted RBP17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 RPAINQ86UA6 219 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 NLRP14Q86W24 1093 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 TBC1D16Q8TBP0 767 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 WDR24Q96S15 920 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 TRIM62Q9BVG3 475 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 STK33Q9BYT3 514 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 ASB14A6NK59 587 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 A8MXQ7 604 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 MYO1CO00159 1063 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 MTF1Q14872 753 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 CDC26Q8NHZ8 85 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 TGS1Q96RS0 853 aaKnown RBP17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 SUCLA2Q9P2R7 463 aaPredicted RBP17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 FBXL5Q9UKA1 691 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 URGCPQ8TCY9 931 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 ZNF560Q96MR9 790 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 NYAP2Q9P242 653 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 TUBE1Q9UJT0 475 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 RECQLP46063 649 aaPredicted RBP17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 NOP9Q86U38 636 aaKnown RBP17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 RGL1Q9NZL6 768 aa17.53■□□□□ 0.4
PCDHA1-203ENST00000504120 GRAMD1AQ96CP6 724 aa17.52■□□□□ 0.4
PCDHA1-203ENST00000504120 CYTH2Q99418 400 aa17.52■□□□□ 0.4
PCDHA1-203ENST00000504120 XAB2Q9HCS7 855 aaKnown RBP17.52■□□□□ 0.4
PCDHA1-203ENST00000504120 GTSE1Q9NYZ3 720 aa17.52■□□□□ 0.4
PCDHA1-203ENST00000504120 DEPDC5O75140 1603 aa17.52■□□□□ 0.4
PCDHA1-203ENST00000504120 DGAT1O75907 488 aa17.52■□□□□ 0.4
PCDHA1-203ENST00000504120 SCP2P22307 547 aa17.52■□□□□ 0.4
PCDHA1-203ENST00000504120 STRIP1Q5VSL9 837 aa17.52■□□□□ 0.4
PCDHA1-203ENST00000504120 CYFIP1Q7L576 1253 aa17.52■□□□□ 0.4
PCDHA1-203ENST00000504120 C1orf54Q8WWF1 131 aa17.52■□□□□ 0.4
PCDHA1-203ENST00000504120 APEX2Q9UBZ4 518 aa17.52■□□□□ 0.4
PCDHA1-203ENST00000504120 CYP26A1O43174 497 aa17.52■□□□□ 0.4
PCDHA1-203ENST00000504120 ARFIP2P53365 341 aa17.52■□□□□ 0.4
PCDHA1-203ENST00000504120 NOP14P78316 857 aaKnown RBP17.52■□□□□ 0.4
PCDHA1-203ENST00000504120 FMR1Q06787 632 aaKnown RBP eCLIP17.52■□□□□ 0.4
PCDHA1-203ENST00000504120 ATL2Q8NHH9 583 aa17.52■□□□□ 0.4
PCDHA1-203ENST00000504120 DNAJC5Q9H3Z4 198 aa17.52■□□□□ 0.4
PCDHA1-203ENST00000504120 KCNQ2O43526 872 aa17.52■□□□□ 0.39
PCDHA1-203ENST00000504120 MMS22LQ6ZRQ5 1243 aa17.52■□□□□ 0.39
PCDHA1-203ENST00000504120 RASGRP2Q7LDG7 609 aa17.52■□□□□ 0.39
PCDHA1-203ENST00000504120 DHX35Q9H5Z1 703 aaKnown RBP17.52■□□□□ 0.39
PCDHA1-203ENST00000504120 HSPBP1Q9NZL4 362 aa17.52■□□□□ 0.39
PCDHA1-203ENST00000504120 UVRAGQ9P2Y5 699 aa17.52■□□□□ 0.39
PCDHA1-203ENST00000504120 STOML1Q9UBI4 398 aa17.52■□□□□ 0.39
PCDHA1-203ENST00000504120 MORC2Q9Y6X9 1032 aaPredicted RBP17.52■□□□□ 0.39
PCDHA1-203ENST00000504120 KRT17Q04695 432 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 STAT4Q14765 748 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 RNF219Q5W0B1 726 aaPredicted RBP17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 L3MBTL1Q9Y468 752 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 CDH6P55285 790 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 TEDDM1Q5T9Z0 273 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 LPAR1Q92633 364 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 ABCF3Q9NUQ8 709 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 SENP1Q9P0U3 644 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 SLC13A4Q9UKG4 626 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 NPHP3-ACAD11A0A0J9YXS1 232 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 CHUKO15111 745 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 ADORA2BP29275 332 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms