RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 TTYH3Q9C0H2 523 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 TMX1Q9H3N1 280 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 CEP72Q9P209 647 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 ANKFY1Q9P2R3 1169 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 TTC26A0AVF1 554 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 MYADML2A6NDP7 307 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 TISP43B9A030 160 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 TREHO43280 583 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 CAND2O75155 1236 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 GPR32O75388 356 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 CCDC172P0C7W6 258 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 MCF2P10911 925 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 DARSP14868 501 aaKnown RBP8.83□□□□□ -1
TOPBP1-202ENST00000503338 CAPN2P17655 700 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 FECHP22830 423 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 MXI1P50539 228 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 CRYBB1P53674 252 aaPredicted RBP8.83□□□□□ -1
TOPBP1-202ENST00000503338 ADKP55263 362 aaKnown RBP8.83□□□□□ -1
TOPBP1-202ENST00000503338 CLDN10P78369 228 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 MYL7Q01449 175 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 DCAF4L1Q3SXM0 396 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 ZNF568Q3ZCX4 644 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 KRT39Q6A163 491 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 CYP26C1Q6V0L0 522 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 CACNA2D4Q7Z3S7 1137 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 CBWD2Q8IUF1 395 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 BRSK2Q8IWQ3 736 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 CD302Q8IX05 232 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 SYN2Q92777 582 aaPredicted RBP8.83□□□□□ -1
TOPBP1-202ENST00000503338 SAAL1Q96ER3 474 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 DNAJC7Q99615 494 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 FAM213AQ9BRX8 229 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 LSM14BQ9BX40 385 aaKnown RBP8.83□□□□□ -1
TOPBP1-202ENST00000503338 FAM49AQ9H0Q0 323 aaPredicted RBP8.83□□□□□ -1
TOPBP1-202ENST00000503338 IKZF4Q9H2S9 585 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 ADAMTS10Q9H324 1103 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 TMEM8AQ9HCN3 771 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 PTPRHQ9HD43 1115 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 ABHD10Q9NUJ1 306 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 RBAKQ9NYW8 714 aaPredicted RBP8.83□□□□□ -1
TOPBP1-202ENST00000503338 GCNT4Q9P109 453 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 USP20Q9Y2K6 914 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 PTPN22Q9Y2R2 807 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 PTCH2Q9Y6C5 1203 aa8.83□□□□□ -1
TOPBP1-202ENST00000503338 SCN10AQ9Y5Y9 1956 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 ZSWIM8A7E2V4 1837 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 SIP14410 1827 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 A0A1B0GUA9 196 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 GOLGA8IPA6NC78 632 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 GOLGA8JA6NMD2 632 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 KBTBD13C9JR72 458 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 ZC3H11AO75152 810 aaKnown RBP eCLIP8.82□□□□□ -1
TOPBP1-202ENST00000503338 IL18RAPO95256 599 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 GJB1P08034 283 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 CLTAP09496 248 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 EIF4BP23588 611 aaKnown RBP8.82□□□□□ -1
TOPBP1-202ENST00000503338 PON1P27169 355 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 HNRNPH3P31942 346 aaKnown RBP8.82□□□□□ -1
TOPBP1-202ENST00000503338 FXR1P51114 621 aaKnown RBP eCLIP8.82□□□□□ -1
TOPBP1-202ENST00000503338 ACLYP53396 1101 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 CCZ1BP86790 482 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 CCZ1P86791 482 aaPredicted RBP8.82□□□□□ -1
TOPBP1-202ENST00000503338 CDK17Q00537 523 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 KCNMA1Q12791 1236 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 PTK7Q13308 1070 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 ITGA7Q13683 1181 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 PKN2Q16513 984 aaKnown RBP8.82□□□□□ -1
TOPBP1-202ENST00000503338 MEA1Q16626 185 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 KIZQ2M2Z5 673 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 NOTUMQ6P988 496 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 CATSPER4Q7RTX7 472 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 SERINC5Q86VE9 423 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 CPLX3Q8WVH0 158 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 DNAJB3Q8WWF6 145 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 TSPAN18Q96SJ8 248 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.82□□□□□ -1
TOPBP1-202ENST00000503338 KCNF1Q9H3M0 494 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 KCND1Q9NSA2 647 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 FAM207AQ9NSI2 230 aaPredicted RBP8.82□□□□□ -1
TOPBP1-202ENST00000503338 PLAGL2Q9UPG8 496 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 COQ4Q9Y3A0 265 aa8.82□□□□□ -1
TOPBP1-202ENST00000503338 A0A0U1RQG5 324 aaPredicted RBP8.81□□□□□ -1
TOPBP1-202ENST00000503338 LRRIQ3A6PVS8 624 aaPredicted RBP8.81□□□□□ -1
TOPBP1-202ENST00000503338 ABLIM1O14639 778 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 B4GALT4O60513 344 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 TSPAN1O60635 241 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 ADRB2P07550 413 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 TRIM49P0CI25 452 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 TRIM49CP0CI26 452 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 UCHL3P15374 230 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 ARF4P18085 180 aaPredicted RBP8.81□□□□□ -1
TOPBP1-202ENST00000503338 TNNI1P19237 187 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 ANXA13P27216 316 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 IRX5P78411 483 aaPredicted RBP8.81□□□□□ -1
TOPBP1-202ENST00000503338 MRPS6P82932 125 aaKnown RBP8.81□□□□□ -1
TOPBP1-202ENST00000503338 LRMPQ12912 555 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 SNX17Q15036 470 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 AMHR2Q16671 573 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 SLC9C1Q4G0N8 1177 aa8.81□□□□□ -1
TOPBP1-202ENST00000503338 FAM47CQ5HY64 1035 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms