RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 CRHR1P34998 444 aa7.66□□□□□ -1.18
NIPBL-203ENST00000503274 MAGEA10P43363 369 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-203ENST00000503274 HHEXQ03014 270 aa7.66□□□□□ -1.18
NIPBL-203ENST00000503274 MFSD5Q6N075 450 aa7.66□□□□□ -1.18
NIPBL-203ENST00000503274 ZNF585AQ6P3V2 769 aa7.66□□□□□ -1.18
NIPBL-203ENST00000503274 IL17RAQ96F46 866 aa7.66□□□□□ -1.18
NIPBL-203ENST00000503274 ZNF512Q96ME7 567 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-203ENST00000503274 CDC5LQ99459 802 aaKnown RBP7.66□□□□□ -1.18
NIPBL-203ENST00000503274 TUBD1Q9UJT1 453 aa7.66□□□□□ -1.18
NIPBL-203ENST00000503274 JAG2Q9Y219 1238 aa7.66□□□□□ -1.18
NIPBL-203ENST00000503274 HOXA3O43365 443 aaPredicted RBP7.65□□□□□ -1.18
NIPBL-203ENST00000503274 ACO1P21399 889 aaKnown RBP7.65□□□□□ -1.18
NIPBL-203ENST00000503274 RECQLP46063 649 aaPredicted RBP7.65□□□□□ -1.18
NIPBL-203ENST00000503274 GZMKP49863 264 aa7.65□□□□□ -1.18
NIPBL-203ENST00000503274 MGAT2Q10469 447 aa7.65□□□□□ -1.18
NIPBL-203ENST00000503274 MRPL49Q13405 166 aaKnown RBP7.65□□□□□ -1.18
NIPBL-203ENST00000503274 SPATS1Q496A3 300 aa7.65□□□□□ -1.18
NIPBL-203ENST00000503274 Q6ZSN1 163 aa7.65□□□□□ -1.18
NIPBL-203ENST00000503274 Q6ZVL8 140 aa7.65□□□□□ -1.18
NIPBL-203ENST00000503274 SGMS1Q86VZ5 419 aa7.65□□□□□ -1.18
NIPBL-203ENST00000503274 OR7D4Q8NG98 312 aa7.65□□□□□ -1.18
NIPBL-203ENST00000503274 NRG4Q8WWG1 115 aa7.65□□□□□ -1.18
NIPBL-203ENST00000503274 FAM89AQ96GI7 184 aa7.65□□□□□ -1.18
NIPBL-203ENST00000503274 EPC1Q9H2F5 836 aa7.65□□□□□ -1.18
NIPBL-203ENST00000503274 BCO1Q9HAY6 547 aa7.65□□□□□ -1.18
NIPBL-203ENST00000503274 TRPS1Q9UHF7 1281 aa7.65□□□□□ -1.18
NIPBL-203ENST00000503274 SAP30BPQ9UHR5 308 aaKnown RBP7.65□□□□□ -1.18
NIPBL-203ENST00000503274 STC2O76061 302 aa7.64□□□□□ -1.19
NIPBL-203ENST00000503274 SELENOPP49908 381 aa7.64□□□□□ -1.19
NIPBL-203ENST00000503274 SLC16A1P53985 500 aa7.64□□□□□ -1.19
NIPBL-203ENST00000503274 APBA1Q02410 837 aa7.64□□□□□ -1.19
NIPBL-203ENST00000503274 TTF1Q15361 905 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-203ENST00000503274 MAMDC4Q6UXC1 1216 aa7.64□□□□□ -1.19
NIPBL-203ENST00000503274 PDZD4Q76G19 769 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-203ENST00000503274 THEMISQ8N1K5 641 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-203ENST00000503274 HOXB13Q92826 284 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-203ENST00000503274 EDAQ92838 391 aa7.64□□□□□ -1.19
NIPBL-203ENST00000503274 BORCS6Q96GS4 357 aa7.64□□□□□ -1.19
NIPBL-203ENST00000503274 KLC2Q9H0B6 622 aa7.64□□□□□ -1.19
NIPBL-203ENST00000503274 AASDHPPTQ9NRN7 309 aa7.64□□□□□ -1.19
NIPBL-203ENST00000503274 LUC7L2Q9Y383 392 aaKnown RBP7.64□□□□□ -1.19
NIPBL-203ENST00000503274 FAM171A2A8MVW0 826 aa7.63□□□□□ -1.19
NIPBL-203ENST00000503274 WASP42768 502 aa7.63□□□□□ -1.19
NIPBL-203ENST00000503274 PER3P56645 1201 aa7.63□□□□□ -1.19
NIPBL-203ENST00000503274 SEPT2Q15019 361 aa7.63□□□□□ -1.19
NIPBL-203ENST00000503274 ELAVL1Q15717 326 aaKnown RBP7.63□□□□□ -1.19
NIPBL-203ENST00000503274 FAM214AQ32MH5 1076 aa7.63□□□□□ -1.19
NIPBL-203ENST00000503274 PLEKHG6Q3KR16 790 aa7.63□□□□□ -1.19
NIPBL-203ENST00000503274 PRRT2Q7Z6L0 340 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-203ENST00000503274 ANKRD35Q8N283 1001 aa7.63□□□□□ -1.19
NIPBL-203ENST00000503274 ZNF808Q8N4W9 903 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-203ENST00000503274 MDM1Q8TC05 714 aa7.63□□□□□ -1.19
NIPBL-203ENST00000503274 DPF2Q92785 391 aa7.63□□□□□ -1.19
NIPBL-203ENST00000503274 DVL3Q92997 716 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-203ENST00000503274 HOOK2Q96ED9 719 aa7.63□□□□□ -1.19
NIPBL-203ENST00000503274 ADOQ96SZ5 270 aa7.63□□□□□ -1.19
NIPBL-203ENST00000503274 UHRF1Q96T88 793 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-203ENST00000503274 KRTAP9-3Q9BYQ3 159 aa7.63□□□□□ -1.19
NIPBL-203ENST00000503274 HECAQ9UBI9 543 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-203ENST00000503274 INTUQ9ULD6 942 aa7.63□□□□□ -1.19
NIPBL-203ENST00000503274 PPM1GO15355 546 aaPredicted RBP7.62□□□□□ -1.19
NIPBL-203ENST00000503274 ADCY6O43306 1168 aa7.62□□□□□ -1.19
NIPBL-203ENST00000503274 MFAP3LO75121 409 aa7.62□□□□□ -1.19
NIPBL-203ENST00000503274 ENDOD1O94919 500 aa7.62□□□□□ -1.19
NIPBL-203ENST00000503274 GNAT2P19087 354 aa7.62□□□□□ -1.19
NIPBL-203ENST00000503274 ADAM17P78536 824 aa7.62□□□□□ -1.19
NIPBL-203ENST00000503274 KIF23Q02241 960 aaPredicted RBP7.62□□□□□ -1.19
NIPBL-203ENST00000503274 TMEM240Q5SV17 173 aa7.62□□□□□ -1.19
NIPBL-203ENST00000503274 PRAMEF14Q5SWL7 426 aa7.62□□□□□ -1.19
NIPBL-203ENST00000503274 SPTY2D1Q68D10 685 aaPredicted RBP7.62□□□□□ -1.19
NIPBL-203ENST00000503274 APBB1IPQ7Z5R6 666 aaPredicted RBP7.62□□□□□ -1.19
NIPBL-203ENST00000503274 PQLC1Q8N2U9 271 aa7.62□□□□□ -1.19
NIPBL-203ENST00000503274 OR2I1PQ8NGU4 316 aa7.62□□□□□ -1.19
NIPBL-203ENST00000503274 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.62□□□□□ -1.19
NIPBL-203ENST00000503274 MIEF2Q96C03 454 aa7.62□□□□□ -1.19
NIPBL-203ENST00000503274 C7orf25Q9BPX7 421 aa7.62□□□□□ -1.19
NIPBL-203ENST00000503274 CCDC88BA6NC98 1476 aa7.62□□□□□ -1.19
NIPBL-203ENST00000503274 ZMYM3Q14202 1370 aa7.61□□□□□ -1.19
NIPBL-203ENST00000503274 CAPN14A8MX76 684 aa7.61□□□□□ -1.19
NIPBL-203ENST00000503274 IPO13O94829 963 aaKnown RBP7.61□□□□□ -1.19
NIPBL-203ENST00000503274 PTPN7P35236 360 aa7.61□□□□□ -1.19
NIPBL-203ENST00000503274 SREBF1P36956 1147 aa7.61□□□□□ -1.19
NIPBL-203ENST00000503274 ADKP55263 362 aaKnown RBP7.61□□□□□ -1.19
NIPBL-203ENST00000503274 MCL1Q07820 350 aa7.61□□□□□ -1.19
NIPBL-203ENST00000503274 PRKD1Q15139 912 aaPredicted RBP7.61□□□□□ -1.19
NIPBL-203ENST00000503274 ODR4Q5SWX8 454 aa7.61□□□□□ -1.19
NIPBL-203ENST00000503274 ELOA2Q8IYF1 753 aaPredicted RBP7.61□□□□□ -1.19
NIPBL-203ENST00000503274 CMTR2Q8IYT2 770 aaKnown RBP7.61□□□□□ -1.19
NIPBL-203ENST00000503274 TRMT2AQ8IZ69 625 aaKnown RBP7.61□□□□□ -1.19
NIPBL-203ENST00000503274 CPA6Q8N4T0 437 aa7.61□□□□□ -1.19
NIPBL-203ENST00000503274 REPS2Q8NFH8 660 aa7.61□□□□□ -1.19
NIPBL-203ENST00000503274 COA7Q96BR5 231 aa7.61□□□□□ -1.19
NIPBL-203ENST00000503274 CDK5RAP1Q96SZ6 601 aaKnown RBP7.61□□□□□ -1.19
NIPBL-203ENST00000503274 C1QTNF3Q9BXJ4 246 aa7.61□□□□□ -1.19
NIPBL-203ENST00000503274 KRTAP3-1Q9BYR8 98 aa7.61□□□□□ -1.19
NIPBL-203ENST00000503274 MUSKO15146 869 aa7.6□□□□□ -1.19
NIPBL-203ENST00000503274 CYP27B1O15528 508 aa7.6□□□□□ -1.19
NIPBL-203ENST00000503274 ZRANB2O95218 330 aaKnown RBP eCLIP7.6□□□□□ -1.19
NIPBL-203ENST00000503274 S100BP04271 92 aaPredicted RBP7.6□□□□□ -1.19
NIPBL-203ENST00000503274 ZNF20P17024 532 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms