RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ANHXE9PGG2 379 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 TMEM189-UBE2V1I3L0A0 370 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 CTDNEP1O95476 244 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 POMCP01189 267 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 ASGR2P07307 311 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 HNRNPA1P09651 372 aaKnown RBP eCLIP6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 SRFP11831 508 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 FDPSP14324 419 aaKnown RBP6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 ARF4P18085 180 aaPredicted RBP6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 KRT2P35908 639 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 RARRES1P49788 294 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 AFF1P51825 1210 aaKnown RBP6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 ELAVL2Q12926 359 aaKnown RBP6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 CAPSQ13938 189 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 UVSSAQ2YD98 709 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 FUT10Q6P4F1 479 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 RSPO2Q6UXX9 243 aaPredicted RBP6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 PIK3AP1Q6ZUJ8 805 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 SKAP1Q86WV1 359 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 POTEDQ86YR6 584 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 MCPH1Q8NEM0 835 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 ZNF707Q96C28 371 aaPredicted RBP6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 DYDC2Q96IM9 177 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 AIFM3Q96NN9 605 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 GAD1Q99259 594 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 EIF2AK1Q9BQI3 630 aaKnown RBP6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 OSBPL6Q9BZF3 934 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 PRKD2Q9BZL6 878 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 NT5C3AQ9H0P0 336 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 C2orf40Q9H1Z8 148 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 FZD8Q9H461 694 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 TTC12Q9H892 705 aaPredicted RBP6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 TUFT1Q9NNX1 390 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 PRMT7Q9NVM4 692 aaPredicted RBP6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 RGL1Q9NZL6 768 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 ADAM28Q9UKQ2 775 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 KCNJ14Q9UNX9 436 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 SF3B1O75533 1304 aaKnown RBP eCLIP6.77□□□□□ -1.32
LSM3P4-201ENST00000502948 PHLPP2Q6ZVD8 1323 aa6.77□□□□□ -1.32
LSM3P4-201ENST00000502948 TRIP11Q15643 1979 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 CFAP54Q96N23 3096 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 INO80B-WBP1J3KQ70 363 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 TGM5O43548 720 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 MARCH6O60337 910 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 N4BP1O75113 896 aaKnown RBP6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 ZMYND10O75800 440 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 WEE2P0C1S8 567 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 LAMP2P13473 410 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 GLRA2P23416 452 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 CA8P35219 290 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 MLH1P40692 756 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 MAGEA9P43362 315 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 OR1G1P47890 313 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 AK2P54819 239 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 STARD6P59095 220 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 TUSC3Q13454 348 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 NAB2Q15742 525 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 ZNF528Q3MIS6 628 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 NCAPH2Q6IBW4 605 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 ASCL5Q7RTU5 278 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 TPH2Q8IWU9 490 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 SLC44A3Q8N4M1 653 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 KCTD17Q8N5Z5 321 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 DTWD2Q8NBA8 298 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 OXER1Q8TDS5 423 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 PIK3R5Q8WYR1 880 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 GTF3C6Q969F1 213 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 ZFP42Q96MM3 310 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 NACC1Q96RE7 527 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 POLR3CQ9BUI4 534 aaPredicted RBP6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 DDX23Q9BUQ8 820 aaKnown RBP6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 EIF2AQ9BY44 585 aaKnown RBP6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 TRIM6Q9C030 488 aaPredicted RBP6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 GBP3Q9H0R5 595 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 RNF39Q9H2S5 420 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 AVENQ9NQS1 362 aaPredicted RBP6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 MIOSQ9NXC5 875 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 FBXW11Q9UKB1 542 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 TPCN1Q9ULQ1 816 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 STK24Q9Y6E0 443 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 PATJQ8NI35 1801 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 FAM186AA6NE01 2351 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 DMDP11532 3685 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 NOTCH4Q99466 2003 aa6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 PDCD11Q14690 1871 aaKnown RBP6.77□□□□□ -1.33
LSM3P4-201ENST00000502948 SPDYE4A6NLX3 237 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 ACKR2O00590 384 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 N4BP3O15049 544 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 ZBTB39O15060 712 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 NEMFO60524 1076 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 MICAL2O94851 1124 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 SPATA31C1P0DKV0 1188 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 SP100P23497 879 aaPredicted RBP6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 RPA1P27694 616 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 SCNN1GP51170 649 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 CYP4A11Q02928 519 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 PRKCQQ04759 706 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 STK3Q13188 491 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 NR5A1Q13285 461 aa6.76□□□□□ -1.33
LSM3P4-201ENST00000502948 HTR4Q13639 388 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms