RNA–Protein interactions for RNA: ENST00000502865.5

SFXN1-204, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 641 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-204ENST00000502865 CHRNA1P02708 482 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 TPM3P06753 285 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 TPM2P07951 284 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 TRIM49P0CI25 452 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 TRIM49CP0CI26 452 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 HARSP12081 509 aaKnown RBP10.62□□□□□ -0.71
SFXN1-204ENST00000502865 ARF4P18085 180 aaPredicted RBP10.62□□□□□ -0.71
SFXN1-204ENST00000502865 EIF4BP23588 611 aaKnown RBP10.62□□□□□ -0.71
SFXN1-204ENST00000502865 TNFSF9P41273 254 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 MATR3P43243 847 aaKnown RBP eCLIP10.62□□□□□ -0.71
SFXN1-204ENST00000502865 ACOT2P49753 483 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 CRYBB1P53674 252 aaPredicted RBP10.62□□□□□ -0.71
SFXN1-204ENST00000502865 MRPS6P82932 125 aaKnown RBP10.62□□□□□ -0.71
SFXN1-204ENST00000502865 CDC42EP1Q00587 391 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 MCL1Q07820 350 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 MGAT3Q09327 533 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 BFSP1Q12934 665 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 SNX17Q15036 470 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 SYCP1Q15431 976 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 TRIM71Q2Q1W2 868 aaKnown RBP10.62□□□□□ -0.71
SFXN1-204ENST00000502865 DCAF17Q5H9S7 520 aaPredicted RBP10.62□□□□□ -0.71
SFXN1-204ENST00000502865 TCERG1LQ5VWI1 586 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 SPECC1LQ69YQ0 1117 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 SLFN12LQ6IEE8 588 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 DPY19L2P1Q6NXN4 242 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 MPZL3Q6UWV2 235 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 CEP120Q8N960 986 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 ARMC5Q96C12 935 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 ZNF830Q96NB3 372 aaPredicted RBP10.62□□□□□ -0.71
SFXN1-204ENST00000502865 ERGIC2Q96RQ1 377 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 POP1Q99575 1024 aaKnown RBP10.62□□□□□ -0.71
SFXN1-204ENST00000502865 TCHPQ9BT92 498 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 CRISPLD2Q9H0B8 497 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 CDT1Q9H211 546 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 PDZD7Q9H5P4 517 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 TNFSF13BQ9Y275 285 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 SIK3Q9Y2K2 1263 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 CENPFP49454 3210 aa10.62□□□□□ -0.71
SFXN1-204ENST00000502865 ITIH6Q6UXX5 1313 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 A0A0U1RQG5 324 aaPredicted RBP10.61□□□□□ -0.71
SFXN1-204ENST00000502865 A0A1B0GUA9 196 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 ZNF233A6NK53 670 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 ARVCFO00192 962 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 MEFVO15553 781 aaPredicted RBP10.61□□□□□ -0.71
SFXN1-204ENST00000502865 B4GALT4O60513 344 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 SGPL1O95470 568 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 AFPP02771 609 aaKnown RBP10.61□□□□□ -0.71
SFXN1-204ENST00000502865 CTSHP09668 335 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 HOXA11P31270 313 aaPredicted RBP10.61□□□□□ -0.71
SFXN1-204ENST00000502865 CDK7P50613 346 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 VAMP7P51809 220 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 APBA1Q02410 837 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 CYP24A1Q07973 514 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 PPP3CAQ08209 521 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 RBL2Q08999 1139 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 PTK7Q13308 1070 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 TMEM132AQ24JP5 1023 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 FKBP15Q5T1M5 1219 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 INTS8Q75QN2 995 aaKnown RBP10.61□□□□□ -0.71
SFXN1-204ENST00000502865 CATSPER4Q7RTX7 472 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 RPAINQ86UA6 219 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 PARD3BQ8TEW8 1205 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 CPLX3Q8WVH0 158 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 CCDC127Q96BQ5 260 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 FAM84AQ96KN4 292 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 PRIMPOLQ96LW4 560 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 CRACR2AQ9BSW2 395 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 MMRN2Q9H8L6 949 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 TOPORSQ9NS56 1045 aaPredicted RBP10.61□□□□□ -0.71
SFXN1-204ENST00000502865 IMPACTQ9P2X3 320 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 NOC2LQ9Y3T9 749 aaKnown RBP10.61□□□□□ -0.71
SFXN1-204ENST00000502865 TRPV2Q9Y5S1 764 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 CDY2AQ9Y6F7 541 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 ANK1P16157 1881 aa10.61□□□□□ -0.71
SFXN1-204ENST00000502865 LRRIQ3A6PVS8 624 aaPredicted RBP10.6□□□□□ -0.71
SFXN1-204ENST00000502865 KIAA0391O15091 583 aaKnown RBP10.6□□□□□ -0.71
SFXN1-204ENST00000502865 EPHB6O15197 1021 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 OGTO15294 1046 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 ERLIN2O94905 339 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 LDHAP00338 332 aaKnown RBP10.6□□□□□ -0.71
SFXN1-204ENST00000502865 TFRCP02786 760 aaKnown RBP10.6□□□□□ -0.71
SFXN1-204ENST00000502865 PTMAP06454 111 aaKnown RBP10.6□□□□□ -0.71
SFXN1-204ENST00000502865 KRT13P13646 458 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 SLC9A1P19634 815 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 THPOP40225 353 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 FMO5P49326 533 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 OSTNP61366 133 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 PPP2R3AQ06190 1150 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 NOLC1Q14978 699 aaKnown RBP eCLIP10.6□□□□□ -0.71
SFXN1-204ENST00000502865 ZNF568Q3ZCX4 644 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 CBWD6Q4V339 395 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 CBWD3Q5JTY5 395 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 CBWD5Q5RIA9 395 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 RSPH3Q86UC2 560 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 FAM228AQ86W67 206 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 TMEM192Q8IY95 271 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 THNSL1Q8IYQ7 743 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 TMC2Q8TDI7 906 aa10.6□□□□□ -0.71
SFXN1-204ENST00000502865 U2AF1L4Q8WU68 220 aaKnown RBP10.6□□□□□ -0.71
SFXN1-204ENST00000502865 CACTINQ8WUQ7 758 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms