RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	TOM1L1	O75674	476 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	SERPINC1	P01008	464 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	MYC	P01106	439 aa	Predicted RBP	13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	COL6A1	P12109	1028 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	PSMC2	P35998	433 aa	Known RBP	13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	PBX1	P40424	430 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	GJA8	P48165	433 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	CYP2J2	P51589	502 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	CRYBB1	P53674	252 aa	Predicted RBP	13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	UBASH3A	P57075	661 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	MCL1	Q07820	350 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	TMEM62	Q0P6H9	643 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	SNX17	Q15036	470 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	FAM26D	Q5JW98	314 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	SLFN12L	Q6IEE8	588 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	PPP1R9B	Q96SB3	815 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	OSMR	Q99650	979 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	TUBGCP2	Q9BSJ2	902 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	CELF4	Q9BZC1	486 aa	Known RBP	13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	PCIF1	Q9H4Z3	704 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	METTL14	Q9HCE5	456 aa	Known RBP	13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	TRMT13	Q9NUP7	481 aa	Known RBP	13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	TNFSF13B	Q9Y275	285 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	TRPV2	Q9Y5S1	764 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	LGALS16	A8MUM7	142 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	TEX33	O43247	280 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	CBFA2T2	O43439	604 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	B4GALT4	O60513	344 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	EXOC3	O60645	756 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	CAND2	O75155	1236 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	CSDE1	O75534	798 aa	Known RBP	13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	CD4	P01730	458 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	CHRNA1	P02708	482 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	ADRB2	P07550	413 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	EPB41	P11171	864 aa	Known RBP	13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	CAPN2	P17655	700 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	ARF4	P18085	180 aa	Predicted RBP	13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	EIF4B	P23588	611 aa	Known RBP	13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	HOXA11	P31270	313 aa	Predicted RBP	13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	PLCB2	Q00722	1185 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	ENPEP	Q07075	957 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	PRPF4B	Q13523	1007 aa	Known RBP	13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	MAN2A1	Q16706	1144 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	CCDC40	Q4G0X9	1142 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	ATF7IP2	Q5U623	682 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	EEF1DP3	Q658K8	133 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	CEP135	Q66GS9	1140 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	TRAF7	Q6Q0C0	670 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	FAM126B	Q8IXS8	530 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	FAM186B	Q8IYM0	893 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	ANKLE1	Q8NAG6	615 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	ANKRD20A12P	Q8NF67	263 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	PLEKHO2	Q8TD55	490 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	POMGNT1	Q8WZA1	660 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	VTI1A	Q96AJ9	217 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	BICD1	Q96G01	975 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394	CDY2A	Q9Y6F7	541 aa		13.26	□□□□□ -0.29
MATR3-231	ENST00000502394		A0A1B0GUA9	196 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	EXTL3	O43909	919 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	MTIF2	P46199	727 aa	Known RBP	13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	PPP2R3A	Q06190	1150 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	C1orf220	Q5T0J3	134 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	C1orf53	Q5VUE5	145 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	MPZL3	Q6UWV2	235 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	RSPH3	Q86UC2	560 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	CBWD2	Q8IUF1	395 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	SPNS2	Q8IVW8	549 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	GPD1L	Q8N335	351 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	SLC35C1	Q96A29	364 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	SAAL1	Q96ER3	474 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	MFSD14A	Q96MC6	490 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	TRPV6	Q9H1D0	765 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	CDT1	Q9H211	546 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	VPS16	Q9H269	839 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	PDZD7	Q9H5P4	517 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	KIAA1586	Q9HCI6	787 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	AGO2	Q9UKV8	859 aa	Known RBP	13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	FRMD4B	Q9Y2L6	1034 aa		13.25	□□□□□ -0.29
MATR3-231	ENST00000502394	GOLGA8IP	A6NC78	632 aa		13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	GOLGA8J	A6NMD2	632 aa		13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	N4BP3	O15049	544 aa		13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	OGT	O15294	1046 aa		13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	CLDN3	O15551	220 aa		13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	LDHA	P00338	332 aa	Known RBP	13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	FGFR4	P22455	802 aa		13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	CCDC173	Q0VFZ6	552 aa		13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	BFSP1	Q12934	665 aa		13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.24	□□□□□ -0.29	1e-323	■■■■■ 39.1
MATR3-231	ENST00000502394	SNRNP35	Q16560	246 aa	Known RBP	13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	VWA3B	Q502W6	1294 aa		13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	INTS8	Q75QN2	995 aa	Known RBP	13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	FAM228A	Q86W67	206 aa		13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	VSTM4	Q8IW00	320 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms