RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 CITO14578 2027 aa17.06■□□□□ 0.32
CPNE1-228ENST00000498814 TRIP11Q15643 1979 aa17.06■□□□□ 0.32
CPNE1-228ENST00000498814 ZMYM2Q9UBW7 1377 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 HNRNPDLO14979 420 aaKnown RBP17.05■□□□□ 0.32
CPNE1-228ENST00000498814 OFD1O75665 1012 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 PRR29P0C7W0 189 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 MYBP10242 640 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 MCF2P10911 925 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 LIG4P49917 911 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 ERVK-21P61565 698 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 DPYDQ12882 1025 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 POSTNQ15063 836 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 ZNF568Q3ZCX4 644 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 PAN2Q504Q3 1202 aaKnown RBP17.05■□□□□ 0.32
CPNE1-228ENST00000498814 FAM26FQ5R3K3 315 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 L1TD1Q5T7N2 865 aaKnown RBP17.05■□□□□ 0.32
CPNE1-228ENST00000498814 STXBP4Q6ZWJ1 553 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 ELOA2Q8IYF1 753 aaPredicted RBP17.05■□□□□ 0.32
CPNE1-228ENST00000498814 CLP1Q92989 425 aaKnown RBP17.05■□□□□ 0.32
CPNE1-228ENST00000498814 BICD1Q96G01 975 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 SAMD11Q96NU1 681 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 ACCSQ96QU6 501 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 TGS1Q96RS0 853 aaKnown RBP17.05■□□□□ 0.32
CPNE1-228ENST00000498814 TCHPQ9BT92 498 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 FGFBP2Q9BYJ0 223 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 SEMA6BQ9H3T3 888 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 RSAD1Q9HA92 442 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 GIT1Q9Y2X7 761 aa17.05■□□□□ 0.32
CPNE1-228ENST00000498814 INPPL1O15357 1258 aa17.04■□□□□ 0.32
CPNE1-228ENST00000498814 CLDN3O15551 220 aa17.04■□□□□ 0.32
CPNE1-228ENST00000498814 RPN1P04843 607 aaKnown RBP17.04■□□□□ 0.32
CPNE1-228ENST00000498814 LINC00271P0C7V0 271 aa17.04■□□□□ 0.32
CPNE1-228ENST00000498814 MCL1Q07820 350 aa17.04■□□□□ 0.32
CPNE1-228ENST00000498814 PSMD2Q13200 908 aa17.04■□□□□ 0.32
CPNE1-228ENST00000498814 EPM2AIP1Q7L775 607 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-228ENST00000498814 HPS3Q969F9 1004 aa17.04■□□□□ 0.32
CPNE1-228ENST00000498814 ZBTB45Q96K62 511 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-228ENST00000498814 MRPL9Q9BYD2 267 aaKnown RBP17.04■□□□□ 0.32
CPNE1-228ENST00000498814 EXOC1Q9NV70 894 aa17.04■□□□□ 0.32
CPNE1-228ENST00000498814 CHD7Q9P2D1 2997 aa17.04■□□□□ 0.32
CPNE1-228ENST00000498814 EXOC7Q9UPT5 735 aa17.04■□□□□ 0.32
CPNE1-228ENST00000498814 RWDD3Q9Y3V2 267 aa17.04■□□□□ 0.32
CPNE1-228ENST00000498814 MRPL42Q9Y6G3 142 aaKnown RBP17.04■□□□□ 0.32
CPNE1-228ENST00000498814 EIF3DO15371 548 aaKnown RBP eCLIP17.03■□□□□ 0.32
CPNE1-228ENST00000498814 KINO60870 393 aaKnown RBP17.03■□□□□ 0.32
CPNE1-228ENST00000498814 GRM5P41594 1212 aa17.03■□□□□ 0.32
CPNE1-228ENST00000498814 KCNA1Q09470 495 aa17.03■□□□□ 0.32
CPNE1-228ENST00000498814 NOLC1Q14978 699 aaKnown RBP eCLIP17.03■□□□□ 0.32
CPNE1-228ENST00000498814 KMT5BQ4FZB7 885 aa17.03■□□□□ 0.32
CPNE1-228ENST00000498814 NOMO2Q5JPE7 1267 aa17.03■□□□□ 0.32
CPNE1-228ENST00000498814 SLC39A4Q6P5W5 647 aa17.03■□□□□ 0.32
CPNE1-228ENST00000498814 LRRC55Q6ZSA7 311 aa17.03■□□□□ 0.32
CPNE1-228ENST00000498814 ZBTB33Q86T24 672 aa17.03■□□□□ 0.32
CPNE1-228ENST00000498814 LRRC43Q8N309 656 aa17.03■□□□□ 0.32
CPNE1-228ENST00000498814 GLIS3Q8NEA6 775 aa17.03■□□□□ 0.32
CPNE1-228ENST00000498814 ZNF507Q8TCN5 953 aa17.03■□□□□ 0.32
CPNE1-228ENST00000498814 CCDC47Q96A33 483 aaKnown RBP17.03■□□□□ 0.32
CPNE1-228ENST00000498814 APOL6Q9BWW8 343 aa17.03■□□□□ 0.32
CPNE1-228ENST00000498814 HAPLN2Q9GZV7 340 aa17.03■□□□□ 0.32
CPNE1-228ENST00000498814 TMEM206Q9H813 350 aa17.03■□□□□ 0.32
CPNE1-228ENST00000498814 TYW1Q9NV66 732 aaKnown RBP17.03■□□□□ 0.32
CPNE1-228ENST00000498814 SNTG2Q9NY99 539 aa17.03■□□□□ 0.32
CPNE1-228ENST00000498814 KANSL3Q9P2N6 904 aa17.03■□□□□ 0.32
CPNE1-228ENST00000498814 ANKFY1Q9P2R3 1169 aa17.03■□□□□ 0.32
CPNE1-228ENST00000498814 HOOK1Q9UJC3 728 aaKnown RBP17.03■□□□□ 0.32
CPNE1-228ENST00000498814 STYXL1Q9Y6J8 313 aa17.03■□□□□ 0.32
CPNE1-228ENST00000498814 UBE4BO95155 1302 aa17.02■□□□□ 0.32
CPNE1-228ENST00000498814 ARL5CA6NH57 179 aa17.02■□□□□ 0.32
CPNE1-228ENST00000498814 ANKRD63C9JTQ0 380 aa17.02■□□□□ 0.32
CPNE1-228ENST00000498814 PRPF6O94906 941 aaKnown RBP17.02■□□□□ 0.32
CPNE1-228ENST00000498814 RHOBTB3O94955 611 aa17.02■□□□□ 0.32
CPNE1-228ENST00000498814 AKAP5P24588 427 aa17.02■□□□□ 0.32
CPNE1-228ENST00000498814 KCNB1Q14721 858 aa17.02■□□□□ 0.32
CPNE1-228ENST00000498814 SLFN12LQ6IEE8 588 aa17.02■□□□□ 0.32
CPNE1-228ENST00000498814 SPRED2Q7Z698 418 aa17.02■□□□□ 0.32
CPNE1-228ENST00000498814 TMEM192Q8IY95 271 aa17.02■□□□□ 0.32
CPNE1-228ENST00000498814 DEFB123Q8N688 67 aa17.02■□□□□ 0.32
CPNE1-228ENST00000498814 URGCPQ8TCY9 931 aa17.02■□□□□ 0.32
CPNE1-228ENST00000498814 GAD1Q99259 594 aa17.02■□□□□ 0.32
CPNE1-228ENST00000498814 C17orf80Q9BSJ5 609 aa17.02■□□□□ 0.32
CPNE1-228ENST00000498814 CCDC94Q9BW85 323 aaPredicted RBP17.02■□□□□ 0.32
CPNE1-228ENST00000498814 CWH43Q9H720 699 aa17.02■□□□□ 0.32
CPNE1-228ENST00000498814 SLC39A2Q9NP94 309 aa17.02■□□□□ 0.32
CPNE1-228ENST00000498814 PARP2Q9UGN5 583 aa17.02■□□□□ 0.32
CPNE1-228ENST00000498814 INPP5FQ9Y2H2 1132 aa17.02■□□□□ 0.32
CPNE1-228ENST00000498814 TRANK1O15050 2925 aa17.02■□□□□ 0.31
CPNE1-228ENST00000498814 A0A0B4J269 797 aa17.01■□□□□ 0.31
CPNE1-228ENST00000498814 RECQL4O94761 1208 aa17.01■□□□□ 0.31
CPNE1-228ENST00000498814 BMPR1AP36894 532 aa17.01■□□□□ 0.31
CPNE1-228ENST00000498814 MLH1P40692 756 aa17.01■□□□□ 0.31
CPNE1-228ENST00000498814 MATR3P43243 847 aaKnown RBP eCLIP17.01■□□□□ 0.31
CPNE1-228ENST00000498814 PNOCQ13519 176 aa17.01■□□□□ 0.31
CPNE1-228ENST00000498814 GRIN2CQ14957 1233 aa17.01■□□□□ 0.31
CPNE1-228ENST00000498814 KYAT1Q16773 422 aa17.01■□□□□ 0.31
CPNE1-228ENST00000498814 BMT2Q1RMZ1 405 aa17.01■□□□□ 0.31
CPNE1-228ENST00000498814 EPC2Q52LR7 807 aa17.01■□□□□ 0.31
CPNE1-228ENST00000498814 Q7L0L9 218 aa17.01■□□□□ 0.31
CPNE1-228ENST00000498814 SYCP3Q8IZU3 236 aa17.01■□□□□ 0.31
CPNE1-228ENST00000498814 CEP120Q8N960 986 aa17.01■□□□□ 0.31
CPNE1-228ENST00000498814 SCFD1Q8WVM8 642 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms