RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 KLRF2D3W0D1 207 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 hCG_1984214I3L0E3 225 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 PLEKHA8P1O95397 391 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 YEATS4O95619 227 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 SCG2P13521 617 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 PI3P19957 117 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 CALML3P27482 149 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 GUCY1A2P33402 732 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 KRT2P35908 639 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 NLRP5P59047 1200 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 ATP2B2Q01814 1243 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 PTPN11Q06124 597 aaPredicted RBP6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 STK38Q15208 465 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 NR0B2Q15466 257 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 PFKFB3Q16875 520 aaPredicted RBP6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 GPATCH4Q5T3I0 446 aaKnown RBP6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 L1TD1Q5T7N2 865 aaKnown RBP6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 PCNX4Q63HM2 1172 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 GALNT17Q6IS24 598 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 CAVIN1Q6NZI2 390 aaKnown RBP6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 C17orf99Q6UX52 265 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 DIS3L2Q8IYB7 885 aaKnown RBP6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 ZNF713Q8N859 430 aaPredicted RBP6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 CCDC148Q8NFR7 591 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 GPT2Q8TD30 523 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 KCNG4Q8TDN1 519 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 PPM1EQ8WY54 764 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 DHX38Q92620 1227 aaKnown RBP6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 MKL1Q969V6 931 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 HOOK2Q96ED9 719 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 RRP36Q96EU6 259 aaKnown RBP6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 ZBED3Q96IU2 234 aaPredicted RBP6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 CHAMP1Q96JM3 812 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 SPZ1Q9BXG8 430 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 GZF1Q9H116 711 aaPredicted RBP6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 DEFB129Q9H1M3 183 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 SH3GLB2Q9NR46 395 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 SEC63Q9UGP8 760 aaKnown RBP6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 MAD2L2Q9UI95 211 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 NOL7Q9UMY1 257 aaKnown RBP6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 CEP131Q9UPN4 1083 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 SNCAIPQ9Y6H5 919 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 TCHHQ07283 1943 aa6.03□□□□□ -1.44
HMGXB4-208ENST00000498325 MYH6P13533 1939 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 FAM86C2PA6NEL3 165 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 UNCXA6NJT0 531 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 BTBD18B2RXH4 712 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 NASPP49321 788 aaPredicted RBP6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 CEBPZQ03701 1054 aaKnown RBP6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 RILPL1Q5EBL4 403 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 TMEM31Q5JXX7 168 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 WIPI1Q5MNZ9 446 aaPredicted RBP6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 CCDC183Q5T5S1 534 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 NBPF12Q5TAG4 269 aaPredicted RBP6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 ANO1Q5XXA6 986 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 APOBEC3FQ8IUX4 373 aaKnown RBP6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 NOSTRINQ8IVI9 506 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 ANKRD13AQ8IZ07 590 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 BICD2Q8TD16 824 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 DCAF4Q8WV16 495 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 UBE2Q2Q8WVN8 375 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 AIFM3Q96NN9 605 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 USP28Q96RU2 1077 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 PHF20Q9BVI0 1012 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 C11orf49Q9H6J7 331 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 SH2D4AQ9H788 454 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 DNAJC18Q9H819 358 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 GJB4Q9NTQ9 266 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 GINM1Q9NU53 330 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 GPATCH2Q9NW75 528 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 VPS54Q9P1Q0 977 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 GPR160Q9UJ42 338 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 SYNPO2Q9UMS6 1093 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 KCNJ14Q9UNX9 436 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 IRAK3Q9Y616 596 aa6.02□□□□□ -1.45
HMGXB4-208ENST00000498325 PFASO15067 1338 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 MYH15Q9Y2K3 1946 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 GOLGA6L3A6NEY3 463 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 KIF28PB7ZC32 967 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 BTBD19C9JJ37 291 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 SPTLC2O15270 562 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 ADCY3O60266 1144 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 PPP6R2O75170 966 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 BMP15O95972 392 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 GOLGA8HP0CJ92 632 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 SNHG28P0DPA3 235 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 PDHBP11177 359 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 EEF2P13639 858 aaKnown RBP6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 HOXD10P28358 340 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 GNA11P29992 359 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 ETV3P41162 512 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 ME1P48163 572 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 AFF3P51826 1226 aaKnown RBP6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 ZNF445P59923 1031 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 MRPS5P82675 430 aaKnown RBP6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 ICA1Q05084 483 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 ZNF543Q08ER8 600 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 RASA3Q14644 834 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 SEPT2Q15019 361 aa6.01□□□□□ -1.45
HMGXB4-208ENST00000498325 SNX17Q15036 470 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms