RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 B3GALT6Q96L58 329 aa20.58■□□□□ 0.89
PRKCB-209ENST00000498058 NFKBIZQ9BYH8 718 aa20.58■□□□□ 0.89
PRKCB-209ENST00000498058 CXCL16Q9H2A7 254 aa20.58■□□□□ 0.89
PRKCB-209ENST00000498058 UBN1Q9NPG3 1134 aa20.58■□□□□ 0.89
PRKCB-209ENST00000498058 USTQ9Y2C2 406 aa20.58■□□□□ 0.89
PRKCB-209ENST00000498058 MTCL1Q9Y4B5 1905 aaKnown RBP20.57■□□□□ 0.88
PRKCB-209ENST00000498058 NPTXRO95502 500 aa20.57■□□□□ 0.88
PRKCB-209ENST00000498058 CATSPER3Q86XQ3 398 aa20.57■□□□□ 0.88
PRKCB-209ENST00000498058 UBALD2Q8IYN6 164 aa20.57■□□□□ 0.88
PRKCB-209ENST00000498058 BSNDQ8WZ55 320 aa20.57■□□□□ 0.88
PRKCB-209ENST00000498058 GPR62Q9BZJ7 368 aa20.57■□□□□ 0.88
PRKCB-209ENST00000498058 RXFP1Q9HBX9 757 aa20.57■□□□□ 0.88
PRKCB-209ENST00000498058 MAN1C1Q9NR34 630 aa20.57■□□□□ 0.88
PRKCB-209ENST00000498058 KLK14Q9P0G3 267 aa20.57■□□□□ 0.88
PRKCB-209ENST00000498058 GIT1Q9Y2X7 761 aa20.57■□□□□ 0.88
PRKCB-209ENST00000498058 A0A1B0GUA9 196 aa20.56■□□□□ 0.88
PRKCB-209ENST00000498058 N4BP1O75113 896 aaKnown RBP20.56■□□□□ 0.88
PRKCB-209ENST00000498058 EDN1P05305 212 aa20.56■□□□□ 0.88
PRKCB-209ENST00000498058 URODP06132 367 aa20.56■□□□□ 0.88
PRKCB-209ENST00000498058 MCM7P33993 719 aa20.56■□□□□ 0.88
PRKCB-209ENST00000498058 TMEM105Q8N8V8 129 aa20.56■□□□□ 0.88
PRKCB-209ENST00000498058 USP20Q9Y2K6 914 aa20.56■□□□□ 0.88
PRKCB-209ENST00000498058 DOCK6Q96HP0 2047 aa20.56■□□□□ 0.88
PRKCB-209ENST00000498058 DOCK8Q8NF50 2099 aa20.55■□□□□ 0.88
PRKCB-209ENST00000498058 SPATA31D3P0C874 917 aa20.55■□□□□ 0.88
PRKCB-209ENST00000498058 XRCC6P12956 609 aaKnown RBP eCLIP20.55■□□□□ 0.881e-7■■■■□ 19.5
PRKCB-209ENST00000498058 GLUD2P49448 558 aa20.55■□□□□ 0.88
PRKCB-209ENST00000498058 DSG1Q02413 1049 aa20.55■□□□□ 0.88
PRKCB-209ENST00000498058 SPATA31D4Q6ZUB0 917 aa20.55■□□□□ 0.88
PRKCB-209ENST00000498058 PLCD3Q8N3E9 789 aa20.55■□□□□ 0.88
PRKCB-209ENST00000498058 PRRX2Q99811 253 aa20.55■□□□□ 0.88
PRKCB-209ENST00000498058 PAAF1Q9BRP4 392 aa20.55■□□□□ 0.88
PRKCB-209ENST00000498058 CHST7Q9NS84 486 aa20.55■□□□□ 0.88
PRKCB-209ENST00000498058 STK39Q9UEW8 545 aa20.55■□□□□ 0.88
PRKCB-209ENST00000498058 USP34Q70CQ2 3546 aa20.55■□□□□ 0.88
PRKCB-209ENST00000498058 LRRIQ4A6NIV6 560 aa20.54■□□□□ 0.88
PRKCB-209ENST00000498058 RFPL2O75678 378 aa20.54■□□□□ 0.88
PRKCB-209ENST00000498058 TRIM29Q14134 588 aa20.54■□□□□ 0.88
PRKCB-209ENST00000498058 CDCA2Q69YH5 1023 aaPredicted RBP20.54■□□□□ 0.88
PRKCB-209ENST00000498058 SLC27A1Q6PCB7 646 aa20.54■□□□□ 0.88
PRKCB-209ENST00000498058 POTEGQ6S5H5 508 aa20.54■□□□□ 0.88
PRKCB-209ENST00000498058 C15orf39Q6ZRI6 1047 aa20.54■□□□□ 0.88
PRKCB-209ENST00000498058 CCDC149Q6ZUS6 474 aa20.54■□□□□ 0.88
PRKCB-209ENST00000498058 CMASQ8NFW8 434 aaPredicted RBP20.54■□□□□ 0.88
PRKCB-209ENST00000498058 TRIM6Q9C030 488 aaPredicted RBP20.54■□□□□ 0.88
PRKCB-209ENST00000498058 FZD8Q9H461 694 aa20.54■□□□□ 0.88
PRKCB-209ENST00000498058 POLD4Q9HCU8 107 aa20.54■□□□□ 0.88
PRKCB-209ENST00000498058 TUFT1Q9NNX1 390 aa20.54■□□□□ 0.88
PRKCB-209ENST00000498058 CCDC195A0A1B0GUA6 201 aa20.53■□□□□ 0.88
PRKCB-209ENST00000498058 H0Y858 1186 aa20.53■□□□□ 0.88
PRKCB-209ENST00000498058 NCBP1Q09161 790 aaKnown RBP20.53■□□□□ 0.88
PRKCB-209ENST00000498058 ZNF174Q15697 407 aa20.53■□□□□ 0.88
PRKCB-209ENST00000498058 ECM1Q16610 540 aa20.53■□□□□ 0.88
PRKCB-209ENST00000498058 FUT10Q6P4F1 479 aa20.53■□□□□ 0.88
PRKCB-209ENST00000498058 PPP4R3CPQ6ZMV5 832 aa20.53■□□□□ 0.88
PRKCB-209ENST00000498058 CCDC83Q8IWF9 413 aa20.53■□□□□ 0.88
PRKCB-209ENST00000498058 ZNF707Q96C28 371 aaPredicted RBP20.53■□□□□ 0.88
PRKCB-209ENST00000498058 CCDC43Q96MW1 224 aaKnown RBP20.53■□□□□ 0.88
PRKCB-209ENST00000498058 PARP2Q9UGN5 583 aa20.53■□□□□ 0.88
PRKCB-209ENST00000498058 SPDYE4A6NLX3 237 aa20.52■□□□□ 0.88
PRKCB-209ENST00000498058 ADH1AP07327 375 aa20.52■□□□□ 0.88
PRKCB-209ENST00000498058 RPL17P18621 184 aaKnown RBP20.52■□□□□ 0.88
PRKCB-209ENST00000498058 RABEP1Q15276 862 aa20.52■□□□□ 0.88
PRKCB-209ENST00000498058 PALB2Q86YC2 1186 aa20.52■□□□□ 0.88
PRKCB-209ENST00000498058 GLYCTKQ8IVS8 523 aa20.52■□□□□ 0.88
PRKCB-209ENST00000498058 POLR3CQ9BUI4 534 aaPredicted RBP20.52■□□□□ 0.88
PRKCB-209ENST00000498058 COLEC11Q9BWP8 271 aa20.52■□□□□ 0.88
PRKCB-209ENST00000498058 PDZD7Q9H5P4 517 aa20.52■□□□□ 0.88
PRKCB-209ENST00000498058 VWA8A3KMH1 1905 aa20.51■□□□□ 0.87
PRKCB-209ENST00000498058 PTGESO14684 152 aa20.51■□□□□ 0.87
PRKCB-209ENST00000498058 GLUD1P00367 558 aa20.51■□□□□ 0.87
PRKCB-209ENST00000498058 IGFBP6P24592 240 aaPredicted RBP20.51■□□□□ 0.87
PRKCB-209ENST00000498058 GRIK3Q13003 919 aa20.51■□□□□ 0.87
PRKCB-209ENST00000498058 FAM187BQ17R55 369 aa20.51■□□□□ 0.87
PRKCB-209ENST00000498058 EEF1DP3Q658K8 133 aa20.51■□□□□ 0.87
PRKCB-209ENST00000498058 CWF19L1Q69YN2 538 aaKnown RBP20.51■□□□□ 0.87
PRKCB-209ENST00000498058 LILRA6Q6PI73 481 aa20.51■□□□□ 0.87
PRKCB-209ENST00000498058 OTOP3Q7RTS5 596 aa20.51■□□□□ 0.87
PRKCB-209ENST00000498058 C4orf32Q8N8J7 132 aa20.51■□□□□ 0.87
PRKCB-209ENST00000498058 RSAD2Q8WXG1 361 aa20.51■□□□□ 0.87
PRKCB-209ENST00000498058 ACSF2Q96CM8 615 aaPredicted RBP20.51■□□□□ 0.87
PRKCB-209ENST00000498058 CCDC113Q9H0I3 377 aa20.51■□□□□ 0.87
PRKCB-209ENST00000498058 KCNK12Q9HB15 430 aa20.51■□□□□ 0.87
PRKCB-209ENST00000498058 ADAM28Q9UKQ2 775 aa20.51■□□□□ 0.87
PRKCB-209ENST00000498058 SSX2IPQ9Y2D8 614 aa20.51■□□□□ 0.87
PRKCB-209ENST00000498058 TRIP11Q15643 1979 aa20.51■□□□□ 0.87
PRKCB-209ENST00000498058 TGM5O43548 720 aa20.5■□□□□ 0.87
PRKCB-209ENST00000498058 GALR2O43603 387 aaPredicted RBP20.5■□□□□ 0.87
PRKCB-209ENST00000498058 NARSO43776 548 aaKnown RBP20.5■□□□□ 0.87
PRKCB-209ENST00000498058 PAPLNO95428 1278 aa20.5■□□□□ 0.87
PRKCB-209ENST00000498058 OR52Z1P0C646 297 aa20.5■□□□□ 0.87
PRKCB-209ENST00000498058 NPR3P17342 541 aa20.5■□□□□ 0.87
PRKCB-209ENST00000498058 RPA1P27694 616 aa20.5■□□□□ 0.87
PRKCB-209ENST00000498058 NBR1Q14596 966 aa20.5■□□□□ 0.87
PRKCB-209ENST00000498058 NAB2Q15742 525 aa20.5■□□□□ 0.87
PRKCB-209ENST00000498058 RTP2Q5QGT7 225 aa20.5■□□□□ 0.87
PRKCB-209ENST00000498058 PADI6Q6TGC4 694 aa20.5■□□□□ 0.87
PRKCB-209ENST00000498058 PRSS55Q6UWB4 352 aaPredicted RBP20.5■□□□□ 0.87
PRKCB-209ENST00000498058 MCPH1Q8NEM0 835 aa20.5■□□□□ 0.87
PRKCB-209ENST00000498058 HASPINQ8TF76 798 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms