RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 NLRP11P59045 1033 aaKnown RBP13.23□□□□□ -0.29
HPS1-213ENST00000497527 ADAM17P78536 824 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 HTRA3P83110 453 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 CDK17Q00537 523 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 CAP1Q01518 475 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 PTPN11Q06124 597 aaPredicted RBP13.23□□□□□ -0.29
HPS1-213ENST00000497527 MCL1Q07820 350 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 TRIM32Q13049 653 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 NOLC1Q14978 699 aaKnown RBP eCLIP13.23□□□□□ -0.29
HPS1-213ENST00000497527 PSMD6Q15008 389 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 KRT39Q6A163 491 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 SESTD1Q86VW0 696 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 PARD3BQ8TEW8 1205 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 SYN2Q92777 582 aaPredicted RBP13.23□□□□□ -0.29
HPS1-213ENST00000497527 FAM81BQ96LP2 452 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 ADPGKQ9BRR6 497 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 FAM213AQ9BRX8 229 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 TSEN34Q9BSV6 310 aaKnown RBP13.23□□□□□ -0.29
HPS1-213ENST00000497527 TMEM8AQ9HCN3 771 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 KCND1Q9NSA2 647 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 HDAC6Q9UBN7 1215 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 GTF2IRD1Q9UHL9 959 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 TRIM17Q9Y577 477 aa13.23□□□□□ -0.29
HPS1-213ENST00000497527 MYADML2A6NDP7 307 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 GOLGA6L9A6NEM1 432 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 MOXD2PA6NHM9 499 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 ZSCAN12O43309 604 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 GJB1P08034 283 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 TRIM49P0CI25 452 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 TRIM49CP0CI26 452 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 MCF2P10911 925 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 HSPA6P17066 643 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 PROZP22891 400 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 PON1P27169 355 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 HNRNPH3P31942 346 aaKnown RBP13.22□□□□□ -0.29
HPS1-213ENST00000497527 ZNF568Q3ZCX4 644 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 CXCL17Q6UXB2 119 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 TMEM139Q8IV31 216 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 BRSK2Q8IWQ3 736 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 CRACR2AQ9BSW2 395 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 SEZ6LQ9BYH1 1024 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 FAM49AQ9H0Q0 323 aaPredicted RBP13.22□□□□□ -0.29
HPS1-213ENST00000497527 RBAKQ9NYW8 714 aaPredicted RBP13.22□□□□□ -0.29
HPS1-213ENST00000497527 PYCARDQ9ULZ3 195 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 PLAGL2Q9UPG8 496 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 RALGAPA2Q2PPJ7 1873 aa13.22□□□□□ -0.29
HPS1-213ENST00000497527 IPO7O95373 1038 aaKnown RBP13.21□□□□□ -0.29
HPS1-213ENST00000497527 ASGR1P07306 291 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 CCDC172P0C7W6 258 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 AXLP30530 894 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 CYLC1P35663 651 aaPredicted RBP13.21□□□□□ -0.29
HPS1-213ENST00000497527 KLK7P49862 253 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 POLR2FP61218 127 aaKnown RBP13.21□□□□□ -0.29
HPS1-213ENST00000497527 GOLGA8FQ08AF8 430 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 GOLGA8DPQ0D2H9 430 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 MEA1Q16626 185 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 NBPF20Q3BBV1 942 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 DCAF4L1Q3SXM0 396 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 KLHDC7AQ5VTJ3 777 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 PDXDC1Q6P996 788 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 TRIM65Q6PJ69 517 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 CCDC155Q8N6L0 562 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 ARRDC4Q8NCT1 418 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 EHBP1Q8NDI1 1231 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 CCDC127Q96BQ5 260 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 ZBTB45Q96K62 511 aaPredicted RBP13.21□□□□□ -0.29
HPS1-213ENST00000497527 SPAG5Q96R06 1193 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 PTPRHQ9HD43 1115 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 AGPAT5Q9NUQ2 364 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 USP20Q9Y2K6 914 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 COQ4Q9Y3A0 265 aa13.21□□□□□ -0.29
HPS1-213ENST00000497527 LRRIQ3A6PVS8 624 aaPredicted RBP13.2□□□□□ -0.3
HPS1-213ENST00000497527 TREHO43280 583 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 ZC3H11AO75152 810 aaKnown RBP eCLIP13.2□□□□□ -0.3
HPS1-213ENST00000497527 IL18RAPO95256 599 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 EDN1P05305 212 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 HARSP12081 509 aaKnown RBP13.2□□□□□ -0.3
HPS1-213ENST00000497527 UCHL3P15374 230 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 TNNI1P19237 187 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 SLC9A1P19634 815 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 ACOT2P49753 483 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 CRYBB1P53674 252 aaPredicted RBP13.2□□□□□ -0.3
HPS1-213ENST00000497527 CLDN10P78369 228 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 IRX5P78411 483 aaPredicted RBP13.2□□□□□ -0.3
HPS1-213ENST00000497527 PPP3CAQ08209 521 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 KCNA10Q16322 511 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 SLC9C1Q4G0N8 1177 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 EPC2Q52LR7 807 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 FAM47CQ5HY64 1035 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 SFMBT2Q5VUG0 894 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 CCSAPQ6IQ19 270 aaPredicted RBP13.2□□□□□ -0.3
HPS1-213ENST00000497527 RRAGAQ7L523 313 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 CATSPER4Q7RTX7 472 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 CCDC170Q8IYT3 715 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 FBXL13Q8NEE6 735 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 DNAJB3Q8WWF6 145 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 ZBTB10Q96DT7 871 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 GLT1D1Q96MS3 346 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 CGRRF1Q99675 332 aa13.2□□□□□ -0.3
HPS1-213ENST00000497527 TMEM117Q9H0C3 514 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms