RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 RRM1P23921 792 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 MC4RP32245 332 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 CASP2P42575 452 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 LIMS1P48059 325 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 SMAD3P84022 425 aaKnown RBP4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 FOXO4P98177 505 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 STK3Q13188 491 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 SMAD2Q15796 467 aaKnown RBP4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 LONRF1Q17RB8 773 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 VWA3BQ502W6 1294 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 PRR31Q5SQ13 230 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 C1orf228Q6PIY5 440 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 FKBP9P1Q75LS8 142 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 FAM129CQ86XR2 697 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 ZNF354CQ86Y25 554 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 EFHBQ8N7U6 833 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 KIAA1958Q8N8K9 716 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 CCDC89Q8N998 374 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 PPHLN1Q8NEY8 458 aaKnown RBP4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 OR2W6PQ8NHA6 318 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 ASB15Q8WXK1 588 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 DDX11Q96FC9 970 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 MPP4Q96JB8 637 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 GPR101Q96P66 508 aaPredicted RBP4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 SLC12A5Q9H2X9 1139 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 TCF7L1Q9HCS4 588 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 EMC7Q9NPA0 242 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 DDX21Q9NR30 783 aaKnown RBP eCLIP4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 KLHL11Q9NVR0 708 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 THG1LQ9NWX6 298 aaKnown RBP4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 CLIC5Q9NZA1 410 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 NUB1Q9Y5A7 615 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 FRMPD2Q68DX3 1309 aaPredicted RBP4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 NCOA2Q15596 1464 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 ZNF518AQ6AHZ1 1483 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 SPTBN4Q9H254 2564 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 ABHD14A-ACY1A0A1B0GW23 586 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 TCERG1O14776 1098 aaKnown RBP4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 IL18BPO95998 194 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 CT47B1P0C2W7 299 aaPredicted RBP4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 CYP2C8P10632 490 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 SLC9A1P19634 815 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 IARSP41252 1262 aaKnown RBP4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 FNTBP49356 437 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 RENBPP51606 427 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 KIF11P52732 1056 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 GJA9P57773 515 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 KRT72Q14CN4 511 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 TUBB8Q3ZCM7 444 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 CD300LDQ6UXZ3 194 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 ATG14Q6ZNE5 492 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 MMS22LQ6ZRQ5 1243 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 FNIP1Q8TF40 1166 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 SKA1Q96BD8 255 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 ERP27Q96DN0 273 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 CLIP3Q96DZ5 547 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 FUBP3Q96I24 572 aaKnown RBP eCLIP4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 SIGLEC10Q96LC7 697 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 SCLT1Q96NL6 688 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 TTC1Q99614 292 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 C11orf84Q9BUA3 381 aaPredicted RBP4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 AMNQ9BXJ7 453 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 MS4A5Q9H3V2 200 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 RIC8BQ9NVN3 520 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 SPATA6Q9NWH7 488 aaPredicted RBP4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 FNIP2Q9P278 1114 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 RALYQ9UKM9 306 aaKnown RBP4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 PNMA8BQ9ULN7 279 aaPredicted RBP4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 PCDHGB3Q9Y5G1 929 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 DGKBQ9Y6T7 804 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 RPGRIP1LQ68CZ1 1315 aa4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 WDR33Q9C0J8 1336 aaKnown RBP4.42□□□□□ -1.7
EXOSC3-208ENST00000496910 IQGAP2Q13576 1575 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 NCOA3Q9Y6Q9 1424 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 H7C1D1 291 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 hCG_1984214I3L0E3 225 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 PLSCR1O15162 318 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 FOXP2O15409 715 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 PAX4O43316 350 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 ZEB2O60315 1214 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 GAS7O60861 476 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 RHOBTB3O94955 611 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 AGR2O95994 175 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 MT-CO1P00395 513 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 U2AF1L5P0DN76 240 aaPredicted RBP4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 MYBL2P10244 700 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 PFKLP17858 780 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 PI3P19957 117 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 SCNN1BP51168 640 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 PHC1P78364 1004 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 U2AF1Q01081 240 aaKnown RBP eCLIP4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 CAP1Q01518 475 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 MOGSQ13724 837 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 PCBP2Q15366 365 aaKnown RBP eCLIP4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 TOMM20Q15388 145 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 PUM3Q15397 648 aaKnown RBP4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 TERF2Q15554 542 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 INAVAQ3KP66 663 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 ARHGAP29Q52LW3 1261 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms