RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 CLDN3O15551 220 aa18.38■□□□□ 0.53
LMNA-216ENST00000496738 GDF6Q6KF10 455 aaPredicted RBP18.38■□□□□ 0.53
LMNA-216ENST00000496738 RNF180Q86T96 592 aa18.38■□□□□ 0.53
LMNA-216ENST00000496738 CPB2Q96IY4 423 aa18.38■□□□□ 0.53
LMNA-216ENST00000496738 OSMRQ99650 979 aa18.38■□□□□ 0.53
LMNA-216ENST00000496738 A0A0B4J269 797 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 TOM1L1O75674 476 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 ACTN1P12814 892 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 SLC9A1P19634 815 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 FMO5P49326 533 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 TRIM14Q14142 442 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 ATF7IP2Q5U623 682 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 EEF1DP3Q658K8 133 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 SLFN12LQ6IEE8 588 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 ZPBP2Q6X784 338 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 NFKBIZQ9BYH8 718 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 ADAMTS10Q9H324 1103 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 TOPORSQ9NS56 1045 aaPredicted RBP18.37■□□□□ 0.53
LMNA-216ENST00000496738 GTF2IRD1Q9UHL9 959 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 EXTL3O43909 919 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 CST5P28325 142 aaPredicted RBP18.37■□□□□ 0.53
LMNA-216ENST00000496738 KRT9P35527 623 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 GCLMP48507 274 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 WNT7BP56706 349 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 CYP24A1Q07973 514 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 PPP3CAQ08209 521 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 C1orf220Q5T0J3 134 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 LHX8Q68G74 356 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 NEK11Q8NG66 645 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 FBXL18Q96ME1 805 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 TTYH3Q9C0H2 523 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 PRMT7Q9NVM4 692 aaPredicted RBP18.37■□□□□ 0.53
LMNA-216ENST00000496738 GCNT4Q9P109 453 aa18.37■□□□□ 0.53
LMNA-216ENST00000496738 SCN10AQ9Y5Y9 1956 aa18.36■□□□□ 0.53
LMNA-216ENST00000496738 CEP350Q5VT06 3117 aa18.36■□□□□ 0.53
LMNA-216ENST00000496738 GPR32O75388 356 aa18.36■□□□□ 0.53
LMNA-216ENST00000496738 DLATP10515 647 aaKnown RBP18.36■□□□□ 0.53
LMNA-216ENST00000496738 GNAT1P11488 350 aa18.36■□□□□ 0.53
LMNA-216ENST00000496738 HOXC8P31273 242 aa18.36■□□□□ 0.53
LMNA-216ENST00000496738 TNFSF9P41273 254 aa18.36■□□□□ 0.53
LMNA-216ENST00000496738 AMHR2Q16671 573 aa18.36■□□□□ 0.53
LMNA-216ENST00000496738 ZNF568Q3ZCX4 644 aa18.36■□□□□ 0.53
LMNA-216ENST00000496738 CRELD2Q6UXH1 353 aaPredicted RBP18.36■□□□□ 0.53
LMNA-216ENST00000496738 PCSK9Q8NBP7 692 aaKnown RBP18.36■□□□□ 0.53
LMNA-216ENST00000496738 PTPN22Q9Y2R2 807 aa18.36■□□□□ 0.53
LMNA-216ENST00000496738 GRIN2DO15399 1336 aa18.36■□□□□ 0.53
LMNA-216ENST00000496738 LRRIQ3A6PVS8 624 aaPredicted RBP18.35■□□□□ 0.53
LMNA-216ENST00000496738 ACLYP53396 1101 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 OSTNP61366 133 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 MYL7Q01449 175 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 POU5F1BQ06416 359 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 LMBRD2Q68DH5 695 aaPredicted RBP18.35■□□□□ 0.53
LMNA-216ENST00000496738 ZNF410Q86VK4 478 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 CNGA4Q8IV77 575 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 UNC93B1Q9H1C4 597 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 ABHD10Q9NUJ1 306 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 LUC7L2Q9Y383 392 aaKnown RBP18.35■□□□□ 0.53
LMNA-216ENST00000496738 ZNF233A6NK53 670 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 ABLIM1O14639 778 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 MAPK13O15264 365 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 ERLIN2O94905 339 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 EXOC3L4Q17RC7 722 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 TSHZ1Q6ZSZ6 1077 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 IFNLR1Q8IU57 520 aaPredicted RBP18.35■□□□□ 0.53
LMNA-216ENST00000496738 WNT8BQ93098 351 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 MFSD14AQ96MC6 490 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 NUP58Q9BVL2 599 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.35■□□□□ 0.53
LMNA-216ENST00000496738 NLRC4Q9NPP4 1024 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 CAPN11Q9UMQ6 739 aa18.35■□□□□ 0.53
LMNA-216ENST00000496738 SLC20A2Q08357 652 aa18.34■□□□□ 0.53
LMNA-216ENST00000496738 NOLC1Q14978 699 aaKnown RBP eCLIP18.34■□□□□ 0.53
LMNA-216ENST00000496738 DNTTIP2Q5QJE6 756 aaKnown RBP18.34■□□□□ 0.53
LMNA-216ENST00000496738 MPZL3Q6UWV2 235 aa18.34■□□□□ 0.53
LMNA-216ENST00000496738 GBP6Q6ZN66 633 aa18.34■□□□□ 0.53
LMNA-216ENST00000496738 TMEM139Q8IV31 216 aa18.34■□□□□ 0.53
LMNA-216ENST00000496738 THNSL1Q8IYQ7 743 aa18.34■□□□□ 0.53
LMNA-216ENST00000496738 CEP120Q8N960 986 aa18.34■□□□□ 0.53
LMNA-216ENST00000496738 PARD3BQ8TEW8 1205 aa18.34■□□□□ 0.53
LMNA-216ENST00000496738 BAG1Q99933 345 aaPredicted RBP18.34■□□□□ 0.53
LMNA-216ENST00000496738 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.34■□□□□ 0.534e-7■■■■■ 38
LMNA-216ENST00000496738 RBAKQ9NYW8 714 aaPredicted RBP18.34■□□□□ 0.53
LMNA-216ENST00000496738 CNTNAP2Q9UHC6 1331 aa18.34■□□□□ 0.53
LMNA-216ENST00000496738 BRCA2P51587 3418 aa18.34■□□□□ 0.53
LMNA-216ENST00000496738 TSPAN1O60635 241 aa18.34■□□□□ 0.53
LMNA-216ENST00000496738 NOL4O94818 638 aa18.34■□□□□ 0.53
LMNA-216ENST00000496738 ARF4P18085 180 aaPredicted RBP18.34■□□□□ 0.53
LMNA-216ENST00000496738 PON1P27169 355 aa18.34■□□□□ 0.53
LMNA-216ENST00000496738 TMEM40Q8WWA1 233 aa18.34■□□□□ 0.53
LMNA-216ENST00000496738 GCOM2Q9BZD3 368 aaPredicted RBP18.34■□□□□ 0.53
LMNA-216ENST00000496738 PDE11AQ9HCR9 933 aa18.34■□□□□ 0.53
LMNA-216ENST00000496738 LRRN2O75325 713 aa18.33■□□□□ 0.53
LMNA-216ENST00000496738 MCL1Q07820 350 aa18.33■□□□□ 0.53
LMNA-216ENST00000496738 MTFR1Q15390 333 aa18.33■□□□□ 0.53
LMNA-216ENST00000496738 CDT1Q9H211 546 aa18.33■□□□□ 0.53
LMNA-216ENST00000496738 PDZD7Q9H5P4 517 aa18.33■□□□□ 0.53
LMNA-216ENST00000496738 PTPRHQ9HD43 1115 aa18.33■□□□□ 0.53
LMNA-216ENST00000496738 TNFSF13BQ9Y275 285 aa18.33■□□□□ 0.53
LMNA-216ENST00000496738 FRMPD3Q5JV73 1810 aa18.33■□□□□ 0.52
LMNA-216ENST00000496738 FAM189A1O60320 539 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms