RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 WDR59Q6PJI9 974 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 APOA5Q6Q788 366 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 TMC4Q7Z404 712 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 PYROXD1Q8WU10 500 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 LPIN2Q92539 896 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 EME1Q96AY2 570 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 MTMR8Q96EF0 704 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 HAUS7Q99871 368 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 GPATCH1Q9BRR8 931 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 ZHX3Q9H4I2 956 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 SENP1Q9P0U3 644 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 PPARGC1AQ9UBK2 798 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 RSL24D1Q9UHA3 163 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 DBNLQ9UJU6 430 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 SMG5Q9UPR3 1016 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 STARD13Q9Y3M8 1113 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 NPHP3-ACAD11A0A0J9YXS1 232 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 EXOC1LA0A1B0GW35 172 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 PFDN6O15212 129 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 STAM2O75886 525 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 OXSR1O95747 527 aaPredicted RBP8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 TTLL1O95922 423 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 UQCRBP14927 111 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 INHBCP55103 352 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 XIAPP98170 497 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 TFCP2Q12800 502 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 SLC45A4Q5BKX6 768 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 CENPUQ71F23 418 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 GSTA5Q7RTV2 222 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 SFR1Q86XK3 245 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 ECHDC2Q86YB7 292 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 CCDC89Q8N998 374 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 TNIP2Q8NFZ5 429 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 RFWD2Q8NHY2 731 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 GATA6Q92908 595 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 DBNDD2Q9BQY9 259 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 CD209Q9NNX6 404 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 EFR3BQ9Y2G0 817 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 PTPN22Q9Y2R2 807 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 TELO2Q9Y4R8 837 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 MYPNQ86TC9 1320 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 POC1B-GALNT4F8VUJ3 575 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 PJA2O43164 708 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 EXOC3O60645 756 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 CAPN1P07384 714 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 LDHCP07864 332 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 SCG2P13521 617 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 HSPA13P48723 471 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 TRPC1P48995 793 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 C1orf141Q5JVX7 400 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 KSR2Q6VAB6 950 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 ASRGL1Q7L266 308 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 MTDHQ86UE4 582 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 ZBED8Q8IZ13 594 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 TRIM63Q969Q1 353 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 ERGIC2Q96RQ1 377 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 PLIN2Q99541 437 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 CGREF1Q99674 301 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 RNF41Q9H4P4 317 aaPredicted RBP8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 SMYD3Q9H7B4 428 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 ATP8A2Q9NTI2 1148 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 MTO1Q9Y2Z2 717 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 CROCC2H7BZ55 1655 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 CEMIPQ8WUJ3 1361 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 TTLL13PA6NNM8 815 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 ZNF839A8K0R7 811 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 BTBD19C9JJ37 291 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 H3BRJ5 948 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 AP3B1O00203 1094 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 SPOPO43791 374 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 ZBED1O96006 694 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 CHEK2O96017 543 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 KRT3P12035 628 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 KCNA4P22459 653 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 KLRC1P26715 233 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 ECE1P42892 770 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 RELAQ04206 551 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 EIF4A2Q14240 407 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 TRADDQ15628 312 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 TMEM214Q6NUQ4 689 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 MFSD6Q6ZSS7 791 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 CATIPQ7Z7H3 387 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 LRRC49Q8IUZ0 686 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 PLEKHO2Q8TD55 490 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 GRK7Q8WTQ7 553 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 MAP3K14Q99558 947 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 MYL10Q9BUA6 226 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 RAB34Q9BZG1 259 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 VPS37BQ9H9H4 285 aa8.68□□□□□ -1.02
CRNKL1-205ENST00000496549 NBPF26B4DH59 902 aa8.67□□□□□ -1.02
CRNKL1-205ENST00000496549 B4E1Z4 1266 aa8.67□□□□□ -1.02
CRNKL1-205ENST00000496549 FAM58BPP0C7Q3 252 aa8.67□□□□□ -1.02
CRNKL1-205ENST00000496549 RARGP13631 454 aa8.67□□□□□ -1.02
CRNKL1-205ENST00000496549 ATF2P15336 505 aa8.67□□□□□ -1.02
CRNKL1-205ENST00000496549 EPHB1P54762 984 aa8.67□□□□□ -1.02
CRNKL1-205ENST00000496549 PTGDRQ13258 359 aa8.67□□□□□ -1.02
CRNKL1-205ENST00000496549 SLC18A3Q16572 532 aa8.67□□□□□ -1.02
CRNKL1-205ENST00000496549 SYCP2LQ5T4T6 812 aa8.67□□□□□ -1.02
CRNKL1-205ENST00000496549 KLHL35Q6PF15 583 aa8.67□□□□□ -1.02
CRNKL1-205ENST00000496549 IYDQ6PHW0 289 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms