RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 MTMR3Q13615 1198 aa15.94■□□□□ 0.14
CXCL12-208ENST00000496375 GNL2Q13823 731 aaKnown RBP15.94■□□□□ 0.14
CXCL12-208ENST00000496375 RILPL1Q5EBL4 403 aa15.94■□□□□ 0.14
CXCL12-208ENST00000496375 TTC38Q5R3I4 469 aa15.94■□□□□ 0.14
CXCL12-208ENST00000496375 BRAPQ7Z569 592 aa15.94■□□□□ 0.14
CXCL12-208ENST00000496375 ZFP42Q96MM3 310 aa15.94■□□□□ 0.14
CXCL12-208ENST00000496375 HERC2P3Q9BVR0 1158 aa15.94■□□□□ 0.14
CXCL12-208ENST00000496375 NFKBIZQ9BYH8 718 aa15.94■□□□□ 0.14
CXCL12-208ENST00000496375 SFXN1Q9H9B4 322 aa15.94■□□□□ 0.14
CXCL12-208ENST00000496375 MIOSQ9NXC5 875 aa15.94■□□□□ 0.14
CXCL12-208ENST00000496375 SORCS3Q9UPU3 1222 aa15.94■□□□□ 0.14
CXCL12-208ENST00000496375 DENND4AQ7Z401 1863 aa15.93■□□□□ 0.14
CXCL12-208ENST00000496375 B4GALT5O43286 388 aa15.93■□□□□ 0.14
CXCL12-208ENST00000496375 BRD1O95696 1058 aa15.93■□□□□ 0.14
CXCL12-208ENST00000496375 URODP06132 367 aa15.93■□□□□ 0.14
CXCL12-208ENST00000496375 SPATA31C1P0DKV0 1188 aa15.93■□□□□ 0.14
CXCL12-208ENST00000496375 XRCC6P12956 609 aaKnown RBP eCLIP15.93■□□□□ 0.14
CXCL12-208ENST00000496375 MCM7P33993 719 aa15.93■□□□□ 0.14
CXCL12-208ENST00000496375 VCPP55072 806 aaKnown RBP15.93■□□□□ 0.14
CXCL12-208ENST00000496375 DSC1Q08554 894 aa15.93■□□□□ 0.14
CXCL12-208ENST00000496375 MAEAQ7L5Y9 396 aa15.93■□□□□ 0.14
CXCL12-208ENST00000496375 TAS1R1Q7RTX1 841 aa15.93■□□□□ 0.14
CXCL12-208ENST00000496375 CDR2LQ86X02 465 aaPredicted RBP15.93■□□□□ 0.14
CXCL12-208ENST00000496375 UBALD2Q8IYN6 164 aa15.93■□□□□ 0.14
CXCL12-208ENST00000496375 HACE1Q8IYU2 909 aa15.93■□□□□ 0.14
CXCL12-208ENST00000496375 C4orf32Q8N8J7 132 aa15.93■□□□□ 0.14
CXCL12-208ENST00000496375 PRRX2Q99811 253 aa15.93■□□□□ 0.14
CXCL12-208ENST00000496375 NXF3Q9H4D5 531 aaKnown RBP15.93■□□□□ 0.14
CXCL12-208ENST00000496375 GPRC5CQ9NQ84 441 aa15.93■□□□□ 0.14
CXCL12-208ENST00000496375 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.93■□□□□ 0.14
CXCL12-208ENST00000496375 MTMR6Q9Y217 621 aa15.93■□□□□ 0.14
CXCL12-208ENST00000496375 GIT1Q9Y2X7 761 aa15.93■□□□□ 0.14
CXCL12-208ENST00000496375 RBM19Q9Y4C8 960 aaKnown RBP15.93■□□□□ 0.14
CXCL12-208ENST00000496375 NPTXRO95502 500 aa15.92■□□□□ 0.14
CXCL12-208ENST00000496375 PDGFBP01127 241 aaPredicted RBP15.92■□□□□ 0.14
CXCL12-208ENST00000496375 ASGR2P07307 311 aa15.92■□□□□ 0.14
CXCL12-208ENST00000496375 AKAP5P24588 427 aa15.92■□□□□ 0.14
CXCL12-208ENST00000496375 PTPN5P54829 565 aa15.92■□□□□ 0.14
CXCL12-208ENST00000496375 SLC27A1Q6PCB7 646 aa15.92■□□□□ 0.14
CXCL12-208ENST00000496375 GPR149Q86SP6 731 aa15.92■□□□□ 0.14
CXCL12-208ENST00000496375 CATSPER3Q86XQ3 398 aa15.92■□□□□ 0.14
CXCL12-208ENST00000496375 ZDHHC14Q8IZN3 488 aa15.92■□□□□ 0.14
CXCL12-208ENST00000496375 PLCD3Q8N3E9 789 aa15.92■□□□□ 0.14
CXCL12-208ENST00000496375 RPS6KC1Q96S38 1066 aa15.92■□□□□ 0.14
CXCL12-208ENST00000496375 TUFT1Q9NNX1 390 aa15.92■□□□□ 0.14
CXCL12-208ENST00000496375 LIMD1Q9UGP4 676 aa15.92■□□□□ 0.14
CXCL12-208ENST00000496375 USTQ9Y2C2 406 aa15.92■□□□□ 0.14
CXCL12-208ENST00000496375 SSX2IPQ9Y2D8 614 aa15.92■□□□□ 0.14
CXCL12-208ENST00000496375 C2orf16Q68DN1 1984 aa15.92■□□□□ 0.14
CXCL12-208ENST00000496375 PLXNA3P51805 1871 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 LRRIQ4A6NIV6 560 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 F8W810 466 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 LAD1O00515 517 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 STX6O43752 255 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 MED24O75448 989 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 NR1I2O75469 434 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 AVPR2P30518 371 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 GLUD2P49448 558 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 TCF15Q12870 199 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 RESTQ13127 1097 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 MCTP1Q6DN14 999 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 RNF168Q8IYW5 571 aaPredicted RBP15.91■□□□□ 0.14
CXCL12-208ENST00000496375 MCPH1Q8NEM0 835 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 PHOX2BQ99453 314 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 COLEC11Q9BWP8 271 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 SMOC2Q9H3U7 446 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 MAN1C1Q9NR34 630 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 PCDHB6Q9Y5E3 794 aa15.91■□□□□ 0.14
CXCL12-208ENST00000496375 USP34Q70CQ2 3546 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 A0A1B0GUA9 196 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 VPS37CA5D8V6 355 aaPredicted RBP15.9■□□□□ 0.14
CXCL12-208ENST00000496375 TEX28O15482 410 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 EFEMP2O95967 443 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 ADH1AP07327 375 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 OR52Z1P0C646 297 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 PRPHP41219 470 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 ZNF174Q15697 407 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 KIAA0319Q5VV43 1072 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 POTEGQ6S5H5 508 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 PPP4R3CPQ6ZMV5 832 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 CCDC149Q6ZUS6 474 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 ZBTB8OSQ8IWT0 167 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 GSTCDQ8NEC7 633 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 ACSF2Q96CM8 615 aaPredicted RBP15.9■□□□□ 0.14
CXCL12-208ENST00000496375 NACC1Q96RE7 527 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 POLR3CQ9BUI4 534 aaPredicted RBP15.9■□□□□ 0.14
CXCL12-208ENST00000496375 PRMT7Q9NVM4 692 aaPredicted RBP15.9■□□□□ 0.14
CXCL12-208ENST00000496375 KLK14Q9P0G3 267 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 PARP2Q9UGN5 583 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 MYH15Q9Y2K3 1946 aa15.9■□□□□ 0.14
CXCL12-208ENST00000496375 FXR2P51116 673 aaKnown RBP eCLIP15.89■□□□□ 0.13
CXCL12-208ENST00000496375 DSG1Q02413 1049 aa15.89■□□□□ 0.13
CXCL12-208ENST00000496375 NBR1Q14596 966 aa15.89■□□□□ 0.13
CXCL12-208ENST00000496375 CDCA2Q69YH5 1023 aaPredicted RBP15.89■□□□□ 0.13
CXCL12-208ENST00000496375 C15orf39Q6ZRI6 1047 aa15.89■□□□□ 0.13
CXCL12-208ENST00000496375 ERMNQ8TAM6 284 aa15.89■□□□□ 0.13
CXCL12-208ENST00000496375 PRIMPOLQ96LW4 560 aa15.89■□□□□ 0.13
CXCL12-208ENST00000496375 ZSCAN16Q9H4T2 348 aaPredicted RBP15.89■□□□□ 0.13
CXCL12-208ENST00000496375 RXFP1Q9HBX9 757 aa15.89■□□□□ 0.13
CXCL12-208ENST00000496375 FOXD4L1Q9NU39 408 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms