RNA–Protein interactions for RNA: ENST00000496254.5

GNL3-211, Transcript of G protein nucleolar 3, humanhuman

TSL 5

Gene GNL3, Length 2,118 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNL3-211ENST00000496254 PDGFDQ9GZP0 370 aaPredicted RBP6.11□□□□□ -1.43
GNL3-211ENST00000496254 INTS2Q9H0H0 1204 aaKnown RBP6.11□□□□□ -1.43
GNL3-211ENST00000496254 GDF3Q9NR23 364 aa6.11□□□□□ -1.43
GNL3-211ENST00000496254 COL20A1Q9P218 1284 aa6.11□□□□□ -1.43
GNL3-211ENST00000496254 SUFUQ9UMX1 484 aa6.11□□□□□ -1.43
GNL3-211ENST00000496254 NCANO14594 1321 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 CCDC188H7C350 402 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 MYO1FO00160 1098 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 PGRMC1O00264 195 aaKnown RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 HEXIM1O94992 359 aaKnown RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 TMEM253P0C7T8 217 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 VCAM1P19320 739 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 SCP2P22307 547 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 ABCD1P33897 745 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 PSMC5P62195 406 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 MRPS9P82933 396 aaKnown RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 GTF2BQ00403 316 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 ITGB3BPQ13352 177 aaPredicted RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 PDCLQ13371 301 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 NEDD9Q14511 834 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 COG2Q14746 738 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 DRAP1Q14919 205 aaPredicted RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 PGM5Q15124 567 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 CLUL1Q15846 466 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 CBWD6Q4V339 395 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 DALRD3Q5D0E6 543 aaKnown RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 CBWD3Q5JTY5 395 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 CBWD5Q5RIA9 395 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 C6orf89Q6UWU4 347 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 RNF207Q6ZRF8 634 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 PEX26Q7Z412 305 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 CPXCR1Q8N123 301 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 XXYLT1Q8NBI6 393 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 TPCN2Q8NHX9 752 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 IL31RAQ8NI17 732 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 MAGEC3Q8TD91 643 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 ZNF473Q8WTR7 871 aaKnown RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 HDAC7Q8WUI4 952 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 ZKSCAN4Q969J2 545 aaPredicted RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 TEPSINQ96N21 525 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 RMDN3Q96TC7 470 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 JPH2Q9BR39 696 aaPredicted RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 PIF1Q9H611 641 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 BCAS3Q9H6U6 928 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 ACTR5Q9H9F9 607 aaPredicted RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 AS3MTQ9HBK9 375 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 RAVER2Q9HCJ3 691 aaKnown RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 POLD4Q9HCU8 107 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.1□□□□□ -1.431e-10■■■■■ 85.3
GNL3-211ENST00000496254 HOMER2Q9NSB8 354 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 KLC4Q9NSK0 619 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 ANKEF1Q9NU02 776 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 PKD2L1Q9P0L9 805 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 SUCLA2Q9P2R7 463 aaPredicted RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 MCM8Q9UJA3 840 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 DNAJC12Q9UKB3 198 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 EXOC7Q9UPT5 735 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 DIS3Q9Y2L1 958 aaKnown RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 TMA7Q9Y2S6 64 aaKnown RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 COMMD10Q9Y6G5 202 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 PFASO15067 1338 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 ASTN2O75129 1339 aaPredicted RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 TLDC2A0PJX2 215 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 CFAP69A5D8W1 941 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 HMGB1P1B2RPK0 211 aaPredicted RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 DDX3XO00571 662 aaKnown RBP eCLIP6.1□□□□□ -1.433e-7■■□□□ 13.7
GNL3-211ENST00000496254 PMM2O15305 246 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 TRIM49P0CI25 452 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 TRIM49CP0CI26 452 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 EIF2AK2P19525 551 aaKnown RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 RDXP35241 583 aaKnown RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 MXI1P50539 228 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 DNA2P51530 1060 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 OAZ1P54368 228 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 NCKAP1LP55160 1127 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 MTMR2Q13614 643 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 KIF22Q14807 665 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 TCEAL1Q15170 157 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 PTGISQ16647 500 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 CFAP58Q5T655 872 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 ZNF746Q6NUN9 644 aaPredicted RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 GJB7Q6PEY0 223 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 SLFN11Q7Z7L1 901 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 DAAM2Q86T65 1068 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 NLRP14Q86W24 1093 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 GIMAP7Q8NHV1 300 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 WHAMMQ8TF30 809 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 U2AF1L4Q8WU68 220 aaKnown RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 GLMNQ92990 594 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 GPRASP2Q96D09 838 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 MS4A14Q96JA4 679 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 CDHR1Q96JP9 859 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 RNPC3Q96LT9 517 aaKnown RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 CCT8L2Q96SF2 557 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 NAP1L3Q99457 506 aaPredicted RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.1□□□□□ -1.434e-8■■■□□ 14.9
GNL3-211ENST00000496254 PDCD2LQ9BRP1 358 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 RPAP3Q9H6T3 665 aaPredicted RBP6.1□□□□□ -1.43
GNL3-211ENST00000496254 C17orf75Q9HAS0 396 aa6.1□□□□□ -1.43
GNL3-211ENST00000496254 PXMP2Q9NR77 195 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms